Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4-3A0A0B4J1K1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm10517-202ENSMUST00000192970 758 ntBASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gm4968-201ENSMUST00000071458 858 ntBASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4-3A0A0B4J1K1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4-3A0A0B4J1K1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
Trav4-3A0A0B4J1K1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm18671-201ENSMUST00000214826 683 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 BC037039-201ENSMUST00000192003 2205 ntBASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm12382-201ENSMUST00000122005 922 ntBASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms