Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv19A0A0B4J1H4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv19A0A0B4J1H4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 App-207ENSMUST00000227737 2827 ntBASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv19A0A0B4J1H4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms