Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv5A0A0B4J1G9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv5A0A0B4J1G9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm12382-201ENSMUST00000122005 922 ntBASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Mir5133-201ENSMUST00000174955 77 ntBASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm37292-201ENSMUST00000192062 758 ntBASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Dio3-201ENSMUST00000097228 1449 ntBASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv5A0A0B4J1G9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms