Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm13181-201ENSMUST00000120117 1069 ntBASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm13186-201ENSMUST00000118031 316 ntBASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms