Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Mir3081-201ENSMUST00000175305 84 ntBASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-4A0A075B6B4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-4A0A075B6B4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Gm17807-201ENSMUST00000186869 298 ntBASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-4A0A075B6B4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-4A0A075B6B4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms