Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm17661-201ENSMUST00000170317 270 ntBASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6n-6A0A075B6B2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm7638-201ENSMUST00000121348 967 ntBASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6n-6A0A075B6B2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6n-6A0A075B6B2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6n-6A0A075B6B2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms