Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12-3A0A075B648 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12-3A0A075B648 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12-3A0A075B648 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12-3A0A075B648 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Gm40848-201ENSMUST00000221998 324 ntBASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12-3A0A075B648 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Efs-202ENSMUST00000227037 2540 ntBASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12-3A0A075B648 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms