Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gm18025-201ENSMUST00000221733 862 ntBASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm12382-201ENSMUST00000122005 922 ntBASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm18958-201ENSMUST00000174258 762 ntBASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm42545-201ENSMUST00000202755 922 ntBASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-4A0A075B620 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm9731-201ENSMUST00000209480 747 ntBASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Actl10-202ENSMUST00000226583 1501 ntBASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms