Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Gm43347-201ENSMUST00000200226 580 ntBASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav13d-1A0A075B606 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13d-1A0A075B606 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Rprl3-201ENSMUST00000157400 290 ntBASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Gm44430-201ENSMUST00000203376 995 ntBASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13d-1A0A075B606 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms