Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-916P-201ENST00000516088 109 ntBASIC-1.61□□□□□ -2.67
SHANK1Q9Y566 RNU6-620P-201ENST00000384017 96 ntBASIC-1.61□□□□□ -2.67
SHANK1Q9Y566 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-638P-201ENST00000516582 104 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-627P-201ENST00000364032 102 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-614P-201ENST00000384369 107 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 U6.59-201ENST00000615686 107 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-753P-201ENST00000363926 107 ntBASIC-1.63□□□□□ -2.67
SHANK1Q9Y566 MIR548F3-201ENST00000408509 87 ntBASIC-1.65□□□□□ -2.67
SHANK1Q9Y566 AC079150.2-201ENST00000443733 78 ntBASIC-1.65□□□□□ -2.67
SHANK1Q9Y566 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.68□□□□□ -2.68
SHANK1Q9Y566 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.71□□□□□ -2.68
SHANK1Q9Y566 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 RNU6-133P-201ENST00000383989 107 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 U6.103-201ENST00000637085 61 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 SNORD111B-201ENST00000408587 80 ntBASIC-1.73□□□□□ -2.69
SHANK1Q9Y566 MTND4LP19-201ENST00000403051 166 ntBASIC-1.78□□□□□ -2.69
SHANK1Q9Y566 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.86□□□□□ -2.71
SHANK1Q9Y566 RNU6-724P-201ENST00000390958 105 ntBASIC-1.87□□□□□ -2.71
SHANK1Q9Y566 RNU6-892P-201ENST00000410335 99 ntBASIC-1.87□□□□□ -2.71
SHANK1Q9Y566 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-2□□□□□ -2.73
SHANK1Q9Y566 RNY4P19-201ENST00000362530 96 ntBASIC-2.02□□□□□ -2.73
SHANK1Q9Y566 RNU4-37P-201ENST00000410214 84 ntBASIC-2.02□□□□□ -2.73
SHANK1Q9Y566 MIR548T-201ENST00000408369 74 ntBASIC-2.06□□□□□ -2.74
Retrieved 24 of 98,524 protein–RNA pairs in 5.3 ms