Protein–RNA interactions for Protein: Q9UPQ0

LIMCH1, LIM and calponin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1Q9UPQ0 RNU6-133P-201ENST00000383989 107 ntBASIC-2.21□□□□□ -2.76
LIMCH1Q9UPQ0 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.24□□□□□ -2.77
LIMCH1Q9UPQ0 RNU6-422P-201ENST00000384632 107 ntBASIC-2.25□□□□□ -2.77
LIMCH1Q9UPQ0 MIR124-1-201ENST00000385275 85 ntBASIC-2.25□□□□□ -2.77
LIMCH1Q9UPQ0 MIR548AH-201ENST00000637109 76 ntBASIC-2.26□□□□□ -2.77
LIMCH1Q9UPQ0 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.29□□□□□ -2.78
LIMCH1Q9UPQ0 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.34□□□□□ -2.78
LIMCH1Q9UPQ0 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.35□□□□□ -2.79
LIMCH1Q9UPQ0 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.37□□□□□ -2.79
LIMCH1Q9UPQ0 RNY4P13-201ENST00000384284 96 ntBASIC-2.4□□□□□ -2.79
LIMCH1Q9UPQ0 RNA5SP449-201ENST00000516871 130 ntBASIC-2.56□□□□□ -2.82
LIMCH1Q9UPQ0 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.57□□□□□ -2.82
LIMCH1Q9UPQ0 RNU6-620P-201ENST00000384017 96 ntBASIC-2.6□□□□□ -2.83
LIMCH1Q9UPQ0 RNU6-894P-201ENST00000517094 105 ntBASIC-2.63□□□□□ -2.83
LIMCH1Q9UPQ0 RNU4-85P-201ENST00000364675 123 ntBASIC-2.66□□□□□ -2.84
LIMCH1Q9UPQ0 RNU6-627P-201ENST00000364032 102 ntBASIC-2.67□□□□□ -2.84
LIMCH1Q9UPQ0 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.67□□□□□ -2.84
LIMCH1Q9UPQ0 MIR363-201ENST00000384840 75 ntBASIC-2.71□□□□□ -2.84
LIMCH1Q9UPQ0 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.79□□□□□ -2.86
LIMCH1Q9UPQ0 MIR548T-201ENST00000408369 74 ntBASIC-2.82□□□□□ -2.86
LIMCH1Q9UPQ0 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.84□□□□□ -2.86
LIMCH1Q9UPQ0 RNU6-916P-201ENST00000516088 109 ntBASIC-2.94□□□□□ -2.88
LIMCH1Q9UPQ0 RNY4P19-201ENST00000362530 96 ntBASIC-3.42□□□□□ -2.96
LIMCH1Q9UPQ0 RNU6-892P-201ENST00000410335 99 ntBASIC-3.57□□□□□ -2.98
Retrieved 24 of 98,524 protein–RNA pairs in 5.7 ms