Protein–RNA interactions for Protein: Q9UKF6

CPSF3, Cleavage and polyadenylation specificity factor subunit 3, humanhuman

Known RBP Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3Q9UKF6 U6.103-201ENST00000637085 61 ntBASIC-4.07□□□□□ -3.06
CPSF3Q9UKF6 RNU6-665P-201ENST00000384639 107 ntBASIC-4.22□□□□□ -3.08
CPSF3Q9UKF6 RNU6-485P-201ENST00000363475 107 ntBASIC-4.24□□□□□ -3.09
CPSF3Q9UKF6 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.38□□□□□ -3.11
CPSF3Q9UKF6 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.39□□□□□ -3.11
CPSF3Q9UKF6 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.4□□□□□ -3.11
CPSF3Q9UKF6 RNU6-724P-201ENST00000390958 105 ntBASIC-4.48□□□□□ -3.13
CPSF3Q9UKF6 RNU6-620P-201ENST00000384017 96 ntBASIC-4.54□□□□□ -3.14
CPSF3Q9UKF6 RNU6-133P-201ENST00000383989 107 ntBASIC-4.57□□□□□ -3.14
CPSF3Q9UKF6 RNU6-627P-201ENST00000364032 102 ntBASIC-4.58□□□□□ -3.14
CPSF3Q9UKF6 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.58□□□□□ -3.14
CPSF3Q9UKF6 RNU4-85P-201ENST00000364675 123 ntBASIC-4.7□□□□□ -3.16
CPSF3Q9UKF6 RNA5SP449-201ENST00000516871 130 ntBASIC-4.78□□□□□ -3.17
CPSF3Q9UKF6 RNU6-894P-201ENST00000517094 105 ntBASIC-4.79□□□□□ -3.18
CPSF3Q9UKF6 RNY4P13-201ENST00000384284 96 ntBASIC-4.8□□□□□ -3.18
CPSF3Q9UKF6 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.85□□□□□ -3.19
CPSF3Q9UKF6 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.94□□□□□ -3.2
CPSF3Q9UKF6 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.95□□□□□ -3.2
CPSF3Q9UKF6 MIR363-201ENST00000384840 75 ntBASIC-5.04□□□□□ -3.22
CPSF3Q9UKF6 MIR548T-201ENST00000408369 74 ntBASIC-5.26□□□□□ -3.25
CPSF3Q9UKF6 RNU6-916P-201ENST00000516088 109 ntBASIC-5.26□□□□□ -3.25
CPSF3Q9UKF6 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.54□□□□□ -3.3
CPSF3Q9UKF6 RNU6-892P-201ENST00000410335 99 ntBASIC-5.85□□□□□ -3.35
CPSF3Q9UKF6 RNY4P19-201ENST00000362530 96 ntBASIC-6.41□□□□□ -3.44
Retrieved 24 of 98,524 protein–RNA pairs in 4.3 ms