Protein–RNA interactions for Protein: Q9UFE4

CCDC39, Coiled-coil domain-containing protein 39, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39Q9UFE4 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.3□□□□□ -2.78
CCDC39Q9UFE4 MIR509-1-201ENST00000385265 94 ntBASIC-2.3□□□□□ -2.78
CCDC39Q9UFE4 MIR509-2-201ENST00000390724 91 ntBASIC-2.3□□□□□ -2.78
CCDC39Q9UFE4 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.31□□□□□ -2.78
CCDC39Q9UFE4 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.36□□□□□ -2.79
CCDC39Q9UFE4 RNY4-201ENST00000516507 96 ntBASIC-2.43□□□□□ -2.8
CCDC39Q9UFE4 RNY4P10-201ENST00000365571 96 ntBASIC-2.44□□□□□ -2.8
CCDC39Q9UFE4 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.46□□□□□ -2.8
CCDC39Q9UFE4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.46□□□□□ -2.8
CCDC39Q9UFE4 RNA5SP106-201ENST00000517274 100 ntBASIC-2.48□□□□□ -2.81
CCDC39Q9UFE4 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.5□□□□□ -2.81
CCDC39Q9UFE4 RNU6-916P-201ENST00000516088 109 ntBASIC-2.54□□□□□ -2.82
CCDC39Q9UFE4 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.59□□□□□ -2.82
CCDC39Q9UFE4 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.62□□□□□ -2.83
CCDC39Q9UFE4 MIR363-201ENST00000384840 75 ntBASIC-2.64□□□□□ -2.83
CCDC39Q9UFE4 RNU6-803P-201ENST00000516034 102 ntBASIC-2.65□□□□□ -2.83
CCDC39Q9UFE4 RNY4P19-201ENST00000362530 96 ntBASIC-2.79□□□□□ -2.86
CCDC39Q9UFE4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.79□□□□□ -2.86
CCDC39Q9UFE4 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.88□□□□□ -2.87
CCDC39Q9UFE4 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.9□□□□□ -2.87
CCDC39Q9UFE4 RNY4P13-201ENST00000384284 96 ntBASIC-2.91□□□□□ -2.88
CCDC39Q9UFE4 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.08□□□□□ -2.9
CCDC39Q9UFE4 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.16□□□□□ -2.92
CCDC39Q9UFE4 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.75□□□□□ -3.01
Retrieved 24 of 98,524 protein–RNA pairs in 5.9 ms