Protein–RNA interactions for Protein: Q9NVE5

USP40, Ubiquitin carboxyl-terminal hydrolase 40, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP40Q9NVE5 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.99□□□□□ -2.73
USP40Q9NVE5 RNA5SP449-201ENST00000516871 130 ntBASIC-1.99□□□□□ -2.73
USP40Q9NVE5 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.05□□□□□ -2.74
USP40Q9NVE5 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.08□□□□□ -2.74
USP40Q9NVE5 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.2□□□□□ -2.76
USP40Q9NVE5 RNU6-665P-201ENST00000384639 107 ntBASIC-2.24□□□□□ -2.77
USP40Q9NVE5 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.25□□□□□ -2.77
USP40Q9NVE5 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.31□□□□□ -2.78
USP40Q9NVE5 RNU6-803P-201ENST00000516034 102 ntBASIC-2.33□□□□□ -2.78
USP40Q9NVE5 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.36□□□□□ -2.79
USP40Q9NVE5 MIR509-1-201ENST00000385265 94 ntBASIC-2.43□□□□□ -2.8
USP40Q9NVE5 MIR509-2-201ENST00000390724 91 ntBASIC-2.43□□□□□ -2.8
USP40Q9NVE5 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.52□□□□□ -2.81
USP40Q9NVE5 RNA5SP106-201ENST00000517274 100 ntBASIC-2.55□□□□□ -2.82
USP40Q9NVE5 RNY4P10-201ENST00000365571 96 ntBASIC-2.57□□□□□ -2.82
USP40Q9NVE5 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.59□□□□□ -2.82
USP40Q9NVE5 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.64□□□□□ -2.83
USP40Q9NVE5 RNU6-916P-201ENST00000516088 109 ntBASIC-2.83□□□□□ -2.86
USP40Q9NVE5 MIR363-201ENST00000384840 75 ntBASIC-2.87□□□□□ -2.87
USP40Q9NVE5 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.97□□□□□ -2.88
USP40Q9NVE5 RNY4P19-201ENST00000362530 96 ntBASIC-3.02□□□□□ -2.89
USP40Q9NVE5 RNY4P13-201ENST00000384284 96 ntBASIC-3.02□□□□□ -2.89
USP40Q9NVE5 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.21□□□□□ -2.92
USP40Q9NVE5 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.23□□□□□ -2.93
Retrieved 24 of 98,524 protein–RNA pairs in 3 ms