Protein–RNA interactions for Protein: Q9NVE4

CCDC87, Coiled-coil domain-containing protein 87, humanhuman

Predictions only

Length 849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87Q9NVE4 RNU6-803P-201ENST00000516034 102 ntBASIC-2.91□□□□□ -2.88
CCDC87Q9NVE4 RNU6-894P-201ENST00000517094 105 ntBASIC-2.91□□□□□ -2.88
CCDC87Q9NVE4 MIR509-1-201ENST00000385265 94 ntBASIC-2.92□□□□□ -2.88
CCDC87Q9NVE4 MIR509-2-201ENST00000390724 91 ntBASIC-2.92□□□□□ -2.88
CCDC87Q9NVE4 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.94□□□□□ -2.88
CCDC87Q9NVE4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.94□□□□□ -2.88
CCDC87Q9NVE4 RNU6-627P-201ENST00000364032 102 ntBASIC-2.99□□□□□ -2.89
CCDC87Q9NVE4 RNU6-665P-201ENST00000384639 107 ntBASIC-3□□□□□ -2.89
CCDC87Q9NVE4 RNA5SP106-201ENST00000517274 100 ntBASIC-3.03□□□□□ -2.89
CCDC87Q9NVE4 RNA5SP449-201ENST00000516871 130 ntBASIC-3.04□□□□□ -2.9
CCDC87Q9NVE4 RNU4-85P-201ENST00000364675 123 ntBASIC-3.05□□□□□ -2.9
CCDC87Q9NVE4 RNY4P10-201ENST00000365571 96 ntBASIC-3.07□□□□□ -2.9
CCDC87Q9NVE4 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.08□□□□□ -2.9
CCDC87Q9NVE4 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.12□□□□□ -2.91
CCDC87Q9NVE4 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.19□□□□□ -2.92
CCDC87Q9NVE4 MIR548T-201ENST00000408369 74 ntBASIC-3.19□□□□□ -2.92
CCDC87Q9NVE4 RNU6-892P-201ENST00000410335 99 ntBASIC-3.67□□□□□ -3
CCDC87Q9NVE4 RNY4P13-201ENST00000384284 96 ntBASIC-3.68□□□□□ -3
CCDC87Q9NVE4 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.68□□□□□ -3
CCDC87Q9NVE4 MIR363-201ENST00000384840 75 ntBASIC-3.7□□□□□ -3
CCDC87Q9NVE4 RNU6-916P-201ENST00000516088 109 ntBASIC-3.77□□□□□ -3.01
CCDC87Q9NVE4 RNU6-1128P-201ENST00000362825 109 ntBASIC-4□□□□□ -3.05
CCDC87Q9NVE4 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.08□□□□□ -3.06
CCDC87Q9NVE4 RNY4P19-201ENST00000362530 96 ntBASIC-4.31□□□□□ -3.1
Retrieved 24 of 98,524 protein–RNA pairs in 5.5 ms