Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.54□□□□□ -2.98
TDP1Q9NUW8 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 MIR509-1-201ENST00000385265 94 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 MIR509-2-201ENST00000390724 91 ntBASIC-3.63□□□□□ -2.99
TDP1Q9NUW8 RNU6-620P-201ENST00000384017 96 ntBASIC-3.64□□□□□ -2.99
TDP1Q9NUW8 RNU6-894P-201ENST00000517094 105 ntBASIC-3.72□□□□□ -3
TDP1Q9NUW8 RNA5SP106-201ENST00000517274 100 ntBASIC-3.72□□□□□ -3
TDP1Q9NUW8 RNU6-627P-201ENST00000364032 102 ntBASIC-3.74□□□□□ -3.01
TDP1Q9NUW8 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.79□□□□□ -3.02
TDP1Q9NUW8 RNY4P10-201ENST00000365571 96 ntBASIC-3.81□□□□□ -3.02
TDP1Q9NUW8 RNU6-665P-201ENST00000384639 107 ntBASIC-3.93□□□□□ -3.04
TDP1Q9NUW8 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.98□□□□□ -3.05
TDP1Q9NUW8 MIR548T-201ENST00000408369 74 ntBASIC-4.04□□□□□ -3.06
TDP1Q9NUW8 RNU4-85P-201ENST00000364675 123 ntBASIC-4.11□□□□□ -3.07
TDP1Q9NUW8 RNA5SP449-201ENST00000516871 130 ntBASIC-4.16□□□□□ -3.08
TDP1Q9NUW8 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.2□□□□□ -3.08
TDP1Q9NUW8 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.32□□□□□ -3.1
TDP1Q9NUW8 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.65□□□□□ -3.15
TDP1Q9NUW8 RNY4P13-201ENST00000384284 96 ntBASIC-4.66□□□□□ -3.16
TDP1Q9NUW8 MIR363-201ENST00000384840 75 ntBASIC-4.75□□□□□ -3.17
TDP1Q9NUW8 RNU6-916P-201ENST00000516088 109 ntBASIC-4.85□□□□□ -3.19
TDP1Q9NUW8 RNU6-892P-201ENST00000410335 99 ntBASIC-4.9□□□□□ -3.19
TDP1Q9NUW8 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.26□□□□□ -3.25
TDP1Q9NUW8 RNY4P19-201ENST00000362530 96 ntBASIC-5.78□□□□□ -3.33
Retrieved 24 of 98,524 protein–RNA pairs in 321.2 ms