Protein–RNA interactions for Protein: Q9BQI4

CCDC3, Coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3Q9BQI4 RNY4P10-201ENST00000365571 96 ntBASIC-3.56□□□□□ -2.98
CCDC3Q9BQI4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.57□□□□□ -2.98
CCDC3Q9BQI4 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.58□□□□□ -2.98
CCDC3Q9BQI4 RNA5SP106-201ENST00000517274 100 ntBASIC-3.58□□□□□ -2.98
CCDC3Q9BQI4 RNU6-620P-201ENST00000384017 96 ntBASIC-3.61□□□□□ -2.99
CCDC3Q9BQI4 RNU6-627P-201ENST00000364032 102 ntBASIC-3.63□□□□□ -2.99
CCDC3Q9BQI4 RNU6-665P-201ENST00000384639 107 ntBASIC-3.64□□□□□ -2.99
CCDC3Q9BQI4 RNU6-724P-201ENST00000390958 105 ntBASIC-3.64□□□□□ -2.99
CCDC3Q9BQI4 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.64□□□□□ -2.99
CCDC3Q9BQI4 RNU6-133P-201ENST00000383989 107 ntBASIC-3.73□□□□□ -3.01
CCDC3Q9BQI4 RNU4-85P-201ENST00000364675 123 ntBASIC-3.76□□□□□ -3.01
CCDC3Q9BQI4 RNA5SP449-201ENST00000516871 130 ntBASIC-3.77□□□□□ -3.01
CCDC3Q9BQI4 RNU6-894P-201ENST00000517094 105 ntBASIC-3.86□□□□□ -3.03
CCDC3Q9BQI4 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.89□□□□□ -3.03
CCDC3Q9BQI4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.94□□□□□ -3.04
CCDC3Q9BQI4 MIR548T-201ENST00000408369 74 ntBASIC-4.22□□□□□ -3.08
CCDC3Q9BQI4 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.28□□□□□ -3.09
CCDC3Q9BQI4 RNY4P13-201ENST00000384284 96 ntBASIC-4.37□□□□□ -3.11
CCDC3Q9BQI4 MIR363-201ENST00000384840 75 ntBASIC-4.38□□□□□ -3.11
CCDC3Q9BQI4 RNU6-916P-201ENST00000516088 109 ntBASIC-4.44□□□□□ -3.12
CCDC3Q9BQI4 RNU6-892P-201ENST00000410335 99 ntBASIC-4.59□□□□□ -3.14
CCDC3Q9BQI4 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.81□□□□□ -3.18
CCDC3Q9BQI4 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.89□□□□□ -3.19
CCDC3Q9BQI4 RNY4P19-201ENST00000362530 96 ntBASIC-5.29□□□□□ -3.26
Retrieved 24 of 98,524 protein–RNA pairs in 230.7 ms