Protein–RNA interactions for Protein: Q96MF4

CCDC140, Coiled-coil domain-containing protein 140, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140Q96MF4 MIR124-1-201ENST00000385275 85 ntBASIC-3.03□□□□□ -2.89
CCDC140Q96MF4 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.03□□□□□ -2.89
CCDC140Q96MF4 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.06□□□□□ -2.9
CCDC140Q96MF4 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.08□□□□□ -2.9
CCDC140Q96MF4 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.11□□□□□ -2.91
CCDC140Q96MF4 MIR548AH-201ENST00000637109 76 ntBASIC-3.13□□□□□ -2.91
CCDC140Q96MF4 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.22□□□□□ -2.92
CCDC140Q96MF4 RNU6-665P-201ENST00000384639 107 ntBASIC-3.27□□□□□ -2.93
CCDC140Q96MF4 RNU6-620P-201ENST00000384017 96 ntBASIC-3.28□□□□□ -2.93
CCDC140Q96MF4 RNU6-894P-201ENST00000517094 105 ntBASIC-3.33□□□□□ -2.94
CCDC140Q96MF4 RNU6-627P-201ENST00000364032 102 ntBASIC-3.42□□□□□ -2.96
CCDC140Q96MF4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.45□□□□□ -2.96
CCDC140Q96MF4 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.47□□□□□ -2.96
CCDC140Q96MF4 RNA5SP449-201ENST00000516871 130 ntBASIC-3.5□□□□□ -2.97
CCDC140Q96MF4 MIR548T-201ENST00000408369 74 ntBASIC-3.63□□□□□ -2.99
CCDC140Q96MF4 RNY4P13-201ENST00000384284 96 ntBASIC-3.66□□□□□ -3
CCDC140Q96MF4 RNU4-85P-201ENST00000364675 123 ntBASIC-3.7□□□□□ -3
CCDC140Q96MF4 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.75□□□□□ -3.01
CCDC140Q96MF4 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.9□□□□□ -3.03
CCDC140Q96MF4 MIR363-201ENST00000384840 75 ntBASIC-3.91□□□□□ -3.04
CCDC140Q96MF4 RNU6-916P-201ENST00000516088 109 ntBASIC-4.04□□□□□ -3.06
CCDC140Q96MF4 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.23□□□□□ -3.09
CCDC140Q96MF4 RNU6-892P-201ENST00000410335 99 ntBASIC-4.51□□□□□ -3.13
CCDC140Q96MF4 RNY4P19-201ENST00000362530 96 ntBASIC-4.88□□□□□ -3.19
Retrieved 24 of 98,524 protein–RNA pairs in 3.7 ms