Protein–RNA interactions for Protein: Q8NDQ6

ZNF540, Zinc finger protein 540, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540Q8NDQ6 RNU6-627P-201ENST00000364032 102 ntBASIC-2.36□□□□□ -2.79
ZNF540Q8NDQ6 RNU6-665P-201ENST00000384639 107 ntBASIC-2.36□□□□□ -2.79
ZNF540Q8NDQ6 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.36□□□□□ -2.79
ZNF540Q8NDQ6 RNU4-85P-201ENST00000364675 123 ntBASIC-2.37□□□□□ -2.79
ZNF540Q8NDQ6 RNU6-803P-201ENST00000516034 102 ntBASIC-2.4□□□□□ -2.79
ZNF540Q8NDQ6 RNA5SP106-201ENST00000517274 100 ntBASIC-2.41□□□□□ -2.8
ZNF540Q8NDQ6 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.44□□□□□ -2.8
ZNF540Q8NDQ6 RNA5SP449-201ENST00000516871 130 ntBASIC-2.44□□□□□ -2.8
ZNF540Q8NDQ6 RNY4P10-201ENST00000365571 96 ntBASIC-2.47□□□□□ -2.8
ZNF540Q8NDQ6 MIR548T-201ENST00000408369 74 ntBASIC-2.47□□□□□ -2.8
ZNF540Q8NDQ6 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.48□□□□□ -2.81
ZNF540Q8NDQ6 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.48□□□□□ -2.81
ZNF540Q8NDQ6 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.52□□□□□ -2.81
ZNF540Q8NDQ6 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.67□□□□□ -2.84
ZNF540Q8NDQ6 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.67□□□□□ -2.84
ZNF540Q8NDQ6 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.67□□□□□ -2.84
ZNF540Q8NDQ6 RNU6-892P-201ENST00000410335 99 ntBASIC-2.91□□□□□ -2.88
ZNF540Q8NDQ6 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.93□□□□□ -2.88
ZNF540Q8NDQ6 MIR363-201ENST00000384840 75 ntBASIC-2.94□□□□□ -2.88
ZNF540Q8NDQ6 RNY4P13-201ENST00000384284 96 ntBASIC-2.95□□□□□ -2.88
ZNF540Q8NDQ6 RNU6-916P-201ENST00000516088 109 ntBASIC-3□□□□□ -2.89
ZNF540Q8NDQ6 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.25□□□□□ -2.93
ZNF540Q8NDQ6 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.37□□□□□ -2.95
ZNF540Q8NDQ6 RNY4P19-201ENST00000362530 96 ntBASIC-3.42□□□□□ -2.96
Retrieved 24 of 98,524 protein–RNA pairs in 108.3 ms