Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 SNORD73B-201ENST00000364394 72 ntBASIC-3.65□□□□□ -2.99
CSPG4Q6UVK1 RNU6-892P-201ENST00000410335 99 ntBASIC-3.66□□□□□ -2.99
CSPG4Q6UVK1 RNU6-1011P-201ENST00000384668 107 ntBASIC-3.69□□□□□ -3
CSPG4Q6UVK1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.69□□□□□ -3
CSPG4Q6UVK1 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.71□□□□□ -3
CSPG4Q6UVK1 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.72□□□□□ -3.01
CSPG4Q6UVK1 MIR1302-4-201ENST00000408701 150 ntBASIC-3.76□□□□□ -3.01
CSPG4Q6UVK1 AP001094.1-201ENST00000579805 193 ntBASIC-3.87□□□□□ -3.03
CSPG4Q6UVK1 MTND4LP19-201ENST00000403051 166 ntBASIC-3.88□□□□□ -3.03
CSPG4Q6UVK1 RNU6-724P-201ENST00000390958 105 ntBASIC-3.89□□□□□ -3.03
CSPG4Q6UVK1 MIR4719-201ENST00000585233 84 ntBASIC-3.94□□□□□ -3.04
CSPG4Q6UVK1 MIR548T-201ENST00000408369 74 ntBASIC-3.98□□□□□ -3.05
CSPG4Q6UVK1 RNA5SP170-201ENST00000517150 101 ntBASIC-3.98□□□□□ -3.05
CSPG4Q6UVK1 MT-TR-201ENST00000387439 65 ntBASIC-4.04□□□□□ -3.06
CSPG4Q6UVK1 MIR3668-201ENST00000582138 75 ntBASIC-4.1□□□□□ -3.07
CSPG4Q6UVK1 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.12□□□□□ -3.07
CSPG4Q6UVK1 AC099654.10-201ENST00000640395 161 ntBASIC-4.14□□□□□ -3.07
CSPG4Q6UVK1 snosnR66.1-201ENST00000391095 99 ntBASIC-4.24□□□□□ -3.09
CSPG4Q6UVK1 RNU4-37P-201ENST00000410214 84 ntBASIC-4.31□□□□□ -3.1
CSPG4Q6UVK1 U2.22-201ENST00000636441 106 ntBASIC-4.38□□□□□ -3.11
CSPG4Q6UVK1 AL603908.1-201ENST00000406098 201 ntBASIC-4.39□□□□□ -3.11
CSPG4Q6UVK1 RNU6-638P-201ENST00000516582 104 ntBASIC-4.4□□□□□ -3.11
CSPG4Q6UVK1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.5□□□□□ -3.13
CSPG4Q6UVK1 SNORA72.7-201ENST00000516349 94 ntBASIC-4.58□□□□□ -3.14
Retrieved 24 of 98,524 protein–RNA pairs in 6.4 ms