Protein–RNA interactions for Protein: Q68DE3

USF3, Basic helix-loop-helix domain-containing protein USF3, humanhuman

Predictions only

Length 2,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF3Q68DE3 AL606753.1-201ENST00000427435 87 ntBASIC-4.33□□□□□ -3.1
USF3Q68DE3 RNY4P29-201ENST00000410801 97 ntBASIC-4.35□□□□□ -3.11
USF3Q68DE3 SNORD73B-201ENST00000364394 72 ntBASIC-4.4□□□□□ -3.11
USF3Q68DE3 MIR548T-201ENST00000408369 74 ntBASIC-4.44□□□□□ -3.12
USF3Q68DE3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.48□□□□□ -3.13
USF3Q68DE3 RNU6-724P-201ENST00000390958 105 ntBASIC-4.49□□□□□ -3.13
USF3Q68DE3 AP001094.1-201ENST00000579805 193 ntBASIC-4.49□□□□□ -3.13
USF3Q68DE3 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.52□□□□□ -3.13
USF3Q68DE3 MIR1302-4-201ENST00000408701 150 ntBASIC-4.55□□□□□ -3.14
USF3Q68DE3 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.56□□□□□ -3.14
USF3Q68DE3 MIR4719-201ENST00000585233 84 ntBASIC-4.62□□□□□ -3.15
USF3Q68DE3 MTND4LP19-201ENST00000403051 166 ntBASIC-4.69□□□□□ -3.16
USF3Q68DE3 RNA5SP170-201ENST00000517150 101 ntBASIC-4.72□□□□□ -3.17
USF3Q68DE3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.76□□□□□ -3.17
USF3Q68DE3 MIR3668-201ENST00000582138 75 ntBASIC-4.78□□□□□ -3.18
USF3Q68DE3 MT-TR-201ENST00000387439 65 ntBASIC-4.81□□□□□ -3.18
USF3Q68DE3 AC099654.10-201ENST00000640395 161 ntBASIC-4.82□□□□□ -3.18
USF3Q68DE3 snosnR66.1-201ENST00000391095 99 ntBASIC-4.97□□□□□ -3.21
USF3Q68DE3 AL603908.1-201ENST00000406098 201 ntBASIC-5.15□□□□□ -3.23
USF3Q68DE3 RNU4-37P-201ENST00000410214 84 ntBASIC-5.16□□□□□ -3.24
USF3Q68DE3 U2.22-201ENST00000636441 106 ntBASIC-5.21□□□□□ -3.24
USF3Q68DE3 RNU6-638P-201ENST00000516582 104 ntBASIC-5.28□□□□□ -3.26
USF3Q68DE3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-5.42□□□□□ -3.28
USF3Q68DE3 SNORA72.7-201ENST00000516349 94 ntBASIC-5.5□□□□□ -3.29
Retrieved 24 of 98,524 protein–RNA pairs in 5.9 ms