Protein–RNA interactions for Protein: Q4G0X9

CCDC40, Coiled-coil domain-containing protein 40, humanhuman

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40Q4G0X9 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.46□□□□□ -3.12
CCDC40Q4G0X9 MTND4LP19-201ENST00000403051 166 ntBASIC-4.51□□□□□ -3.13
CCDC40Q4G0X9 RNA5SP449-201ENST00000516871 130 ntBASIC-4.59□□□□□ -3.14
CCDC40Q4G0X9 U6.103-201ENST00000637085 61 ntBASIC-4.62□□□□□ -3.15
CCDC40Q4G0X9 SNORD111B-201ENST00000408587 80 ntBASIC-4.63□□□□□ -3.15
CCDC40Q4G0X9 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.65□□□□□ -3.15
CCDC40Q4G0X9 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.73□□□□□ -3.17
CCDC40Q4G0X9 RNU6-485P-201ENST00000363475 107 ntBASIC-4.75□□□□□ -3.17
CCDC40Q4G0X9 RNU6-627P-201ENST00000364032 102 ntBASIC-4.76□□□□□ -3.17
CCDC40Q4G0X9 RNU4-85P-201ENST00000364675 123 ntBASIC-4.81□□□□□ -3.18
CCDC40Q4G0X9 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.82□□□□□ -3.18
CCDC40Q4G0X9 RNU6-620P-201ENST00000384017 96 ntBASIC-4.87□□□□□ -3.19
CCDC40Q4G0X9 MIR363-201ENST00000384840 75 ntBASIC-4.91□□□□□ -3.2
CCDC40Q4G0X9 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.97□□□□□ -3.21
CCDC40Q4G0X9 RNU4-37P-201ENST00000410214 84 ntBASIC-4.99□□□□□ -3.21
CCDC40Q4G0X9 RNU6-133P-201ENST00000383989 107 ntBASIC-5.03□□□□□ -3.21
CCDC40Q4G0X9 RNU6-724P-201ENST00000390958 105 ntBASIC-5.19□□□□□ -3.24
CCDC40Q4G0X9 RNU6-916P-201ENST00000516088 109 ntBASIC-5.2□□□□□ -3.24
CCDC40Q4G0X9 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.21□□□□□ -3.24
CCDC40Q4G0X9 RNU6-894P-201ENST00000517094 105 ntBASIC-5.24□□□□□ -3.25
CCDC40Q4G0X9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-5.54□□□□□ -3.3
CCDC40Q4G0X9 MIR548T-201ENST00000408369 74 ntBASIC-5.73□□□□□ -3.33
CCDC40Q4G0X9 RNU6-892P-201ENST00000410335 99 ntBASIC-6.17□□□□□ -3.4
CCDC40Q4G0X9 RNY4P19-201ENST00000362530 96 ntBASIC-6.24□□□□□ -3.41
Retrieved 24 of 98,524 protein–RNA pairs in 178.4 ms