Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 SNORD111B-201ENST00000408587 80 ntBASIC-3.22□□□□□ -2.92
CHD9Q3L8U1 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.22□□□□□ -2.92
CHD9Q3L8U1 MIR633-201ENST00000384821 98 ntBASIC-3.22□□□□□ -2.93
CHD9Q3L8U1 AC125388.1-201ENST00000459631 156 ntBASIC-3.22□□□□□ -2.93
CHD9Q3L8U1 RNY4P29-201ENST00000410801 97 ntBASIC-3.24□□□□□ -2.93
CHD9Q3L8U1 RNU6-133P-201ENST00000383989 107 ntBASIC-3.27□□□□□ -2.93
CHD9Q3L8U1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.33□□□□□ -2.94
CHD9Q3L8U1 MIR3668-201ENST00000582138 75 ntBASIC-3.39□□□□□ -2.95
CHD9Q3L8U1 MTND4LP19-201ENST00000403051 166 ntBASIC-3.41□□□□□ -2.95
CHD9Q3L8U1 RNU6-892P-201ENST00000410335 99 ntBASIC-3.43□□□□□ -2.96
CHD9Q3L8U1 AC099654.10-201ENST00000640395 161 ntBASIC-3.48□□□□□ -2.97
CHD9Q3L8U1 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.5□□□□□ -2.97
CHD9Q3L8U1 MT-TR-201ENST00000387439 65 ntBASIC-3.52□□□□□ -2.97
CHD9Q3L8U1 snosnR66.1-201ENST00000391095 99 ntBASIC-3.52□□□□□ -2.97
CHD9Q3L8U1 RNA5SP170-201ENST00000517150 101 ntBASIC-3.53□□□□□ -2.97
CHD9Q3L8U1 RNU6-724P-201ENST00000390958 105 ntBASIC-3.58□□□□□ -2.98
CHD9Q3L8U1 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.65□□□□□ -2.99
CHD9Q3L8U1 AL603908.1-201ENST00000406098 201 ntBASIC-3.74□□□□□ -3.01
CHD9Q3L8U1 MIR548T-201ENST00000408369 74 ntBASIC-3.78□□□□□ -3.01
CHD9Q3L8U1 U2.22-201ENST00000636441 106 ntBASIC-3.78□□□□□ -3.01
CHD9Q3L8U1 SNORA72.7-201ENST00000516349 94 ntBASIC-3.88□□□□□ -3.03
CHD9Q3L8U1 RNU6-638P-201ENST00000516582 104 ntBASIC-3.96□□□□□ -3.04
CHD9Q3L8U1 RNU4-37P-201ENST00000410214 84 ntBASIC-4.04□□□□□ -3.06
CHD9Q3L8U1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.14□□□□□ -3.07
Retrieved 24 of 98,524 protein–RNA pairs in 4.6 ms