Protein–RNA interactions for Protein: P55317

FOXA1, Hepatocyte nuclear factor 3-alpha, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1P55317 SNORD111B-201ENST00000408587 80 ntBASIC-3.53□□□□□ -2.97
FOXA1P55317 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.55□□□□□ -2.98
FOXA1P55317 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.58□□□□□ -2.98
FOXA1P55317 U6.103-201ENST00000637085 61 ntBASIC-3.59□□□□□ -2.98
FOXA1P55317 RNU4-85P-201ENST00000364675 123 ntBASIC-3.64□□□□□ -2.99
FOXA1P55317 RNA5SP449-201ENST00000516871 130 ntBASIC-3.65□□□□□ -2.99
FOXA1P55317 RNU6-485P-201ENST00000363475 107 ntBASIC-3.66□□□□□ -3
FOXA1P55317 RNU6-627P-201ENST00000364032 102 ntBASIC-3.66□□□□□ -3
FOXA1P55317 RNY4P13-201ENST00000384284 96 ntBASIC-3.67□□□□□ -3
FOXA1P55317 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.71□□□□□ -3
FOXA1P55317 RNU6-620P-201ENST00000384017 96 ntBASIC-3.72□□□□□ -3
FOXA1P55317 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.76□□□□□ -3.01
FOXA1P55317 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.81□□□□□ -3.02
FOXA1P55317 MIR363-201ENST00000384840 75 ntBASIC-3.9□□□□□ -3.03
FOXA1P55317 RNU6-133P-201ENST00000383989 107 ntBASIC-3.94□□□□□ -3.04
FOXA1P55317 RNU4-37P-201ENST00000410214 84 ntBASIC-3.94□□□□□ -3.04
FOXA1P55317 RNU6-724P-201ENST00000390958 105 ntBASIC-3.98□□□□□ -3.05
FOXA1P55317 RNU6-894P-201ENST00000517094 105 ntBASIC-4.01□□□□□ -3.05
FOXA1P55317 RNU6-916P-201ENST00000516088 109 ntBASIC-4.06□□□□□ -3.06
FOXA1P55317 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.26□□□□□ -3.09
FOXA1P55317 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.28□□□□□ -3.09
FOXA1P55317 MIR548T-201ENST00000408369 74 ntBASIC-4.41□□□□□ -3.12
FOXA1P55317 RNU6-892P-201ENST00000410335 99 ntBASIC-4.67□□□□□ -3.16
FOXA1P55317 RNY4P19-201ENST00000362530 96 ntBASIC-4.93□□□□□ -3.2
Retrieved 24 of 98,524 protein–RNA pairs in 7.4 ms