Protein–RNA interactions for Protein: P48059

LIMS1, LIM and senescent cell antigen-like-containing domain protein 1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1P48059 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.27□□□□□ -2.77
LIMS1P48059 RNU4-85P-201ENST00000364675 123 ntBASIC-2.28□□□□□ -2.77
LIMS1P48059 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.29□□□□□ -2.78
LIMS1P48059 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.31□□□□□ -2.78
LIMS1P48059 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.37□□□□□ -2.79
LIMS1P48059 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.37□□□□□ -2.79
LIMS1P48059 RNU6-803P-201ENST00000516034 102 ntBASIC-2.37□□□□□ -2.79
LIMS1P48059 MIR509-1-201ENST00000385265 94 ntBASIC-2.46□□□□□ -2.8
LIMS1P48059 MIR509-2-201ENST00000390724 91 ntBASIC-2.46□□□□□ -2.8
LIMS1P48059 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.48□□□□□ -2.81
LIMS1P48059 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.48□□□□□ -2.81
LIMS1P48059 RNA5SP106-201ENST00000517274 100 ntBASIC-2.52□□□□□ -2.81
LIMS1P48059 RNA5SP449-201ENST00000516871 130 ntBASIC-2.53□□□□□ -2.81
LIMS1P48059 RNU6-892P-201ENST00000410335 99 ntBASIC-2.54□□□□□ -2.82
LIMS1P48059 RNY4P10-201ENST00000365571 96 ntBASIC-2.55□□□□□ -2.82
LIMS1P48059 RNU6-665P-201ENST00000384639 107 ntBASIC-2.62□□□□□ -2.83
LIMS1P48059 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.62□□□□□ -2.83
LIMS1P48059 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.93□□□□□ -2.88
LIMS1P48059 RNY4P13-201ENST00000384284 96 ntBASIC-3.08□□□□□ -2.9
LIMS1P48059 RNU6-916P-201ENST00000516088 109 ntBASIC-3.23□□□□□ -2.93
LIMS1P48059 MIR363-201ENST00000384840 75 ntBASIC-3.27□□□□□ -2.93
LIMS1P48059 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.3□□□□□ -2.94
LIMS1P48059 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.55□□□□□ -2.98
LIMS1P48059 RNY4P19-201ENST00000362530 96 ntBASIC-3.64□□□□□ -2.99
Retrieved 24 of 98,524 protein–RNA pairs in 5.4 ms