Protein–RNA interactions for Protein: P34896

SHMT1, Serine hydroxymethyltransferase, cytosolic, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P34896 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.9□□□□□ -2.87
SHMT1P34896 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.91□□□□□ -2.88
SHMT1P34896 RNU6-665P-201ENST00000384639 107 ntBASIC-2.91□□□□□ -2.88
SHMT1P34896 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.93□□□□□ -2.88
SHMT1P34896 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.96□□□□□ -2.88
SHMT1P34896 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.04□□□□□ -2.9
SHMT1P34896 RNU6-724P-201ENST00000390958 105 ntBASIC-3.07□□□□□ -2.9
SHMT1P34896 RNU6-620P-201ENST00000384017 96 ntBASIC-3.08□□□□□ -2.9
SHMT1P34896 RNA5SP449-201ENST00000516871 130 ntBASIC-3.09□□□□□ -2.9
SHMT1P34896 RNU4-85P-201ENST00000364675 123 ntBASIC-3.11□□□□□ -2.91
SHMT1P34896 RNU6-133P-201ENST00000383989 107 ntBASIC-3.15□□□□□ -2.91
SHMT1P34896 RNU6-627P-201ENST00000364032 102 ntBASIC-3.19□□□□□ -2.92
SHMT1P34896 RNU6-894P-201ENST00000517094 105 ntBASIC-3.19□□□□□ -2.92
SHMT1P34896 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.26□□□□□ -2.93
SHMT1P34896 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.29□□□□□ -2.94
SHMT1P34896 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.35□□□□□ -2.95
SHMT1P34896 RNY4P13-201ENST00000384284 96 ntBASIC-3.41□□□□□ -2.96
SHMT1P34896 MIR548T-201ENST00000408369 74 ntBASIC-3.49□□□□□ -2.97
SHMT1P34896 MIR363-201ENST00000384840 75 ntBASIC-3.55□□□□□ -2.98
SHMT1P34896 RNU6-916P-201ENST00000516088 109 ntBASIC-3.67□□□□□ -3
SHMT1P34896 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.74□□□□□ -3.01
SHMT1P34896 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.88□□□□□ -3.03
SHMT1P34896 RNU6-892P-201ENST00000410335 99 ntBASIC-3.91□□□□□ -3.04
SHMT1P34896 RNY4P19-201ENST00000362530 96 ntBASIC-4.31□□□□□ -3.1
Retrieved 24 of 98,524 protein–RNA pairs in 4.8 ms