Protein–RNA interactions for Protein: P31249

HOXD3, Homeobox protein Hox-D3, humanhuman

Predicted RBP Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3P31249 RNU6-422P-201ENST00000384632 107 ntBASIC-1.49□□□□□ -2.65
HOXD3P31249 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.5□□□□□ -2.65
HOXD3P31249 RNU4-85P-201ENST00000364675 123 ntBASIC-1.52□□□□□ -2.65
HOXD3P31249 RNU6-59P-201ENST00000384787 107 ntBASIC-1.54□□□□□ -2.66
HOXD3P31249 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.55□□□□□ -2.66
HOXD3P31249 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.55□□□□□ -2.66
HOXD3P31249 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.58□□□□□ -2.66
HOXD3P31249 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.59□□□□□ -2.66
HOXD3P31249 MIR363-201ENST00000384840 75 ntBASIC-1.63□□□□□ -2.67
HOXD3P31249 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.71□□□□□ -2.68
HOXD3P31249 RNU6-620P-201ENST00000384017 96 ntBASIC-1.72□□□□□ -2.68
HOXD3P31249 SNORD111B-201ENST00000408587 80 ntBASIC-1.72□□□□□ -2.68
HOXD3P31249 RNU6-916P-201ENST00000516088 109 ntBASIC-1.75□□□□□ -2.69
HOXD3P31249 RNU6-627P-201ENST00000364032 102 ntBASIC-1.77□□□□□ -2.69
HOXD3P31249 RNU6-485P-201ENST00000363475 107 ntBASIC-1.79□□□□□ -2.7
HOXD3P31249 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.79□□□□□ -2.7
HOXD3P31249 RNU6-894P-201ENST00000517094 105 ntBASIC-1.86□□□□□ -2.71
HOXD3P31249 U6.103-201ENST00000637085 61 ntBASIC-1.9□□□□□ -2.71
HOXD3P31249 RNY4P19-201ENST00000362530 96 ntBASIC-1.97□□□□□ -2.72
HOXD3P31249 RNU6-892P-201ENST00000410335 99 ntBASIC-1.98□□□□□ -2.73
HOXD3P31249 MIR548T-201ENST00000408369 74 ntBASIC-2.03□□□□□ -2.73
HOXD3P31249 RNU6-724P-201ENST00000390958 105 ntBASIC-2.06□□□□□ -2.74
HOXD3P31249 RNU6-133P-201ENST00000383989 107 ntBASIC-2.07□□□□□ -2.74
HOXD3P31249 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-2.29□□□□□ -2.78
Retrieved 24 of 98,524 protein–RNA pairs in 4.7 ms