Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 SNORD111B-201ENST00000408587 80 ntBASIC-3.82□□□□□ -3.02
SDC1P18827 U6.103-201ENST00000637085 61 ntBASIC-3.84□□□□□ -3.02
SDC1P18827 RNU4-37P-201ENST00000410214 84 ntBASIC-3.96□□□□□ -3.04
SDC1P18827 RNU6-485P-201ENST00000363475 107 ntBASIC-3.98□□□□□ -3.05
SDC1P18827 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.04□□□□□ -3.06
SDC1P18827 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.08□□□□□ -3.06
SDC1P18827 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.15□□□□□ -3.07
SDC1P18827 RNY4P13-201ENST00000384284 96 ntBASIC-4.17□□□□□ -3.08
SDC1P18827 RNU6-620P-201ENST00000384017 96 ntBASIC-4.19□□□□□ -3.08
SDC1P18827 RNU6-627P-201ENST00000364032 102 ntBASIC-4.2□□□□□ -3.08
SDC1P18827 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.21□□□□□ -3.08
SDC1P18827 RNU4-85P-201ENST00000364675 123 ntBASIC-4.22□□□□□ -3.08
SDC1P18827 RNU6-724P-201ENST00000390958 105 ntBASIC-4.24□□□□□ -3.09
SDC1P18827 RNA5SP449-201ENST00000516871 130 ntBASIC-4.25□□□□□ -3.09
SDC1P18827 RNU6-133P-201ENST00000383989 107 ntBASIC-4.28□□□□□ -3.09
SDC1P18827 RNU6-894P-201ENST00000517094 105 ntBASIC-4.44□□□□□ -3.12
SDC1P18827 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.45□□□□□ -3.12
SDC1P18827 MIR363-201ENST00000384840 75 ntBASIC-4.45□□□□□ -3.12
SDC1P18827 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.58□□□□□ -3.14
SDC1P18827 RNU6-916P-201ENST00000516088 109 ntBASIC-4.68□□□□□ -3.16
SDC1P18827 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.83□□□□□ -3.18
SDC1P18827 MIR548T-201ENST00000408369 74 ntBASIC-4.89□□□□□ -3.19
SDC1P18827 RNU6-892P-201ENST00000410335 99 ntBASIC-5.36□□□□□ -3.27
SDC1P18827 RNY4P19-201ENST00000362530 96 ntBASIC-5.67□□□□□ -3.32
Retrieved 24 of 98,524 protein–RNA pairs in 3.6 ms