Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-345P-201ENST00000517001 107 ntBASIC-1.19□□□□□ -2.6
SOX1O00570 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.2□□□□□ -2.6
SOX1O00570 MIR656-201ENST00000385224 78 ntBASIC-1.24□□□□□ -2.61
SOX1O00570 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.25□□□□□ -2.61
SOX1O00570 RNU6-485P-201ENST00000363475 107 ntBASIC-1.25□□□□□ -2.61
SOX1O00570 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.25□□□□□ -2.61
SOX1O00570 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.25□□□□□ -2.61
SOX1O00570 RNU6-133P-201ENST00000383989 107 ntBASIC-1.28□□□□□ -2.61
SOX1O00570 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.28□□□□□ -2.61
SOX1O00570 RNU6-422P-201ENST00000384632 107 ntBASIC-1.29□□□□□ -2.62
SOX1O00570 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.31□□□□□ -2.62
SOX1O00570 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.31□□□□□ -2.62
SOX1O00570 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.33□□□□□ -2.62
SOX1O00570 MIR363-201ENST00000384840 75 ntBASIC-1.35□□□□□ -2.63
SOX1O00570 RNU4-85P-201ENST00000364675 123 ntBASIC-1.39□□□□□ -2.63
SOX1O00570 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.45□□□□□ -2.64
SOX1O00570 RNU6-916P-201ENST00000516088 109 ntBASIC-1.47□□□□□ -2.64
SOX1O00570 RNU6-620P-201ENST00000384017 96 ntBASIC-1.48□□□□□ -2.65
SOX1O00570 RNY4P19-201ENST00000362530 96 ntBASIC-1.51□□□□□ -2.65
SOX1O00570 RNU6-894P-201ENST00000517094 105 ntBASIC-1.52□□□□□ -2.65
SOX1O00570 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.56□□□□□ -2.66
SOX1O00570 RNU6-892P-201ENST00000410335 99 ntBASIC-1.6□□□□□ -2.67
SOX1O00570 RNU6-627P-201ENST00000364032 102 ntBASIC-1.64□□□□□ -2.67
SOX1O00570 MIR548T-201ENST00000408369 74 ntBASIC-1.84□□□□□ -2.7
Retrieved 24 of 98,524 protein–RNA pairs in 203 ms