Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SCARNA17-201ENST00000516183 144 ntBASIC-0.79□□□□□ -2.54
PRPF38BQ5VTL8 MIR6502-201ENST00000617296 76 ntBASIC-0.82□□□□□ -2.54
PRPF38BQ5VTL8 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.83□□□□□ -2.54
PRPF38BQ5VTL8 MIR548T-201ENST00000408369 74 ntBASIC-0.83□□□□□ -2.54
PRPF38BQ5VTL8 MIR3165-201ENST00000579874 75 ntBASIC-0.84□□□□□ -2.54
PRPF38BQ5VTL8 MIR3115-201ENST00000577915 68 ntBASIC-0.85□□□□□ -2.55
PRPF38BQ5VTL8 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.86□□□□□ -2.55
PRPF38BQ5VTL8 RNU6-841P-201ENST00000383872 107 ntBASIC-0.86□□□□□ -2.55
PRPF38BQ5VTL8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.86□□□□□ -2.55
PRPF38BQ5VTL8 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.9□□□□□ -2.55
PRPF38BQ5VTL8 MIR548AM-201ENST00000584298 74 ntBASIC-0.91□□□□□ -2.56
PRPF38BQ5VTL8 AC097484.2-201ENST00000509147 251 ntBASIC-0.93□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.95□□□□□ -2.56
PRPF38BQ5VTL8 RNU6-119P-201ENST00000364882 107 ntBASIC-0.96□□□□□ -2.56
PRPF38BQ5VTL8 RNU6-854P-201ENST00000364036 107 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.97□□□□□ -2.56
PRPF38BQ5VTL8 RNU6-983P-201ENST00000516004 103 ntBASIC-0.99□□□□□ -2.57
PRPF38BQ5VTL8 MIR4520-1-201ENST00000582609 70 ntBASIC-1□□□□□ -2.57
PRPF38BQ5VTL8 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.01□□□□□ -2.57
PRPF38BQ5VTL8 RNY4-201ENST00000516507 96 ntBASIC-1.01□□□□□ -2.57
PRPF38BQ5VTL8 MIR4306-201ENST00000583390 91 ntBASIC-1.03□□□□□ -2.57
PRPF38BQ5VTL8 MIR487B-201ENST00000385021 84 ntBASIC-1.05□□□□□ -2.58
PRPF38BQ5VTL8 MIR1246-201ENST00000636535 73 ntBASIC-1.07□□□□□ -2.58
PRPF38BQ5VTL8 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.11□□□□□ -2.59
PRPF38BQ5VTL8 RNA5SP86-201ENST00000390869 98 ntBASIC-1.12□□□□□ -2.59
PRPF38BQ5VTL8 RNU6-422P-201ENST00000384632 107 ntBASIC-1.13□□□□□ -2.59
PRPF38BQ5VTL8 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.14□□□□□ -2.59
PRPF38BQ5VTL8 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
PRPF38BQ5VTL8 RNU6-620P-201ENST00000384017 96 ntBASIC-1.15□□□□□ -2.59
PRPF38BQ5VTL8 MIR496-201ENST00000385226 102 ntBASIC-1.15□□□□□ -2.59
PRPF38BQ5VTL8 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
PRPF38BQ5VTL8 HLA-S-202ENST00000425174 53 ntBASIC-1.19□□□□□ -2.6
PRPF38BQ5VTL8 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.19□□□□□ -2.6
PRPF38BQ5VTL8 MIR4770-201ENST00000579149 58 ntBASIC-1.24□□□□□ -2.61
PRPF38BQ5VTL8 RNU6-226P-201ENST00000363778 107 ntBASIC-1.25□□□□□ -2.61
PRPF38BQ5VTL8 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.27□□□□□ -2.61
PRPF38BQ5VTL8 RNU6-737P-201ENST00000365370 107 ntBASIC-1.27□□□□□ -2.61
PRPF38BQ5VTL8 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.31□□□□□ -2.62
PRPF38BQ5VTL8 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.31□□□□□ -2.62
PRPF38BQ5VTL8 MIR124-1-201ENST00000385275 85 ntBASIC-1.34□□□□□ -2.62
PRPF38BQ5VTL8 AC108019.1-201ENST00000512540 175 ntBASIC-1.34□□□□□ -2.62
PRPF38BQ5VTL8 RNA5SP93-201ENST00000362525 114 ntBASIC-1.35□□□□□ -2.63
PRPF38BQ5VTL8 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.35□□□□□ -2.63
PRPF38BQ5VTL8 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.37□□□□□ -2.63
PRPF38BQ5VTL8 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.37□□□□□ -2.63
PRPF38BQ5VTL8 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.39□□□□□ -2.63
PRPF38BQ5VTL8 SNORD54-201ENST00000459159 67 ntBASIC-1.39□□□□□ -2.63
PRPF38BQ5VTL8 MIR4756-201ENST00000577874 78 ntBASIC-1.39□□□□□ -2.63
PRPF38BQ5VTL8 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.4□□□□□ -2.63
PRPF38BQ5VTL8 SNORD18.1-201ENST00000363807 70 ntBASIC-1.41□□□□□ -2.64
PRPF38BQ5VTL8 AL731768.1-201ENST00000603124 139 ntBASIC-1.41□□□□□ -2.64
PRPF38BQ5VTL8 MIR4748-201ENST00000578076 82 ntBASIC-1.44□□□□□ -2.64
PRPF38BQ5VTL8 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
PRPF38BQ5VTL8 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.46□□□□□ -2.64
PRPF38BQ5VTL8 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.5□□□□□ -2.65
PRPF38BQ5VTL8 RNU6-118P-201ENST00000516552 102 ntBASIC-1.5□□□□□ -2.65
PRPF38BQ5VTL8 RNU6-627P-201ENST00000364032 102 ntBASIC-1.51□□□□□ -2.65
PRPF38BQ5VTL8 MIR548AH-201ENST00000637109 76 ntBASIC-1.51□□□□□ -2.65
PRPF38BQ5VTL8 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.52□□□□□ -2.65
PRPF38BQ5VTL8 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.52□□□□□ -2.65
PRPF38BQ5VTL8 MIR664B-201ENST00000626756 61 ntBASIC-1.52□□□□□ -2.65
PRPF38BQ5VTL8 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.53□□□□□ -2.65
PRPF38BQ5VTL8 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.53□□□□□ -2.65
PRPF38BQ5VTL8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
PRPF38BQ5VTL8 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.55□□□□□ -2.66
PRPF38BQ5VTL8 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.56□□□□□ -2.66
PRPF38BQ5VTL8 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.57□□□□□ -2.66
PRPF38BQ5VTL8 RNY4P9-201ENST00000363194 97 ntBASIC-1.61□□□□□ -2.67
PRPF38BQ5VTL8 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.61□□□□□ -2.67
PRPF38BQ5VTL8 RNU6-194P-201ENST00000363862 105 ntBASIC-1.62□□□□□ -2.67
PRPF38BQ5VTL8 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
PRPF38BQ5VTL8 RNA5SP405-201ENST00000363059 114 ntBASIC-1.65□□□□□ -2.67
PRPF38BQ5VTL8 SNORD115-45-201ENST00000391078 81 ntBASIC-1.65□□□□□ -2.67
PRPF38BQ5VTL8 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.66□□□□□ -2.68
PRPF38BQ5VTL8 AL359920.1-201ENST00000618332 176 ntBASIC-1.66□□□□□ -2.68
PRPF38BQ5VTL8 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.73□□□□□ -2.69
PRPF38BQ5VTL8 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.74□□□□□ -2.69
PRPF38BQ5VTL8 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.76□□□□□ -2.69
PRPF38BQ5VTL8 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.78□□□□□ -2.69
PRPF38BQ5VTL8 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.81□□□□□ -2.7
PRPF38BQ5VTL8 MIR3139-201ENST00000579145 76 ntBASIC-1.82□□□□□ -2.7
PRPF38BQ5VTL8 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.83□□□□□ -2.7
PRPF38BQ5VTL8 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.85□□□□□ -2.71
PRPF38BQ5VTL8 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.86□□□□□ -2.71
PRPF38BQ5VTL8 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.87□□□□□ -2.71
PRPF38BQ5VTL8 RNY4P25-201ENST00000459254 96 ntBASIC-1.88□□□□□ -2.71
PRPF38BQ5VTL8 MT-TM-201ENST00000387377 68 ntBASIC-1.9□□□□□ -2.71
PRPF38BQ5VTL8 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.95□□□□□ -2.72
PRPF38BQ5VTL8 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.97□□□□□ -2.72
PRPF38BQ5VTL8 MIR5693-201ENST00000577722 73 ntBASIC-2□□□□□ -2.73
PRPF38BQ5VTL8 RNU6-892P-201ENST00000410335 99 ntBASIC-2.05□□□□□ -2.74
PRPF38BQ5VTL8 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.06□□□□□ -2.74
PRPF38BQ5VTL8 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.07□□□□□ -2.74
PRPF38BQ5VTL8 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms