Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORD18.1-201ENST00000363807 70 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR1254-1-201ENST00000408257 97 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 AC108019.1-201ENST00000512540 175 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR4770-201ENST00000579149 58 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR548AM-201ENST00000584298 74 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 RNU6-983P-201ENST00000516004 103 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 AC138207.3-201ENST00000585289 166 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.71□□□□□ -2.52
RFX1P22670 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.71□□□□□ -2.52
RFX1P22670 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.72□□□□□ -2.52
RFX1P22670 SNORD113-3-201ENST00000364830 72 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6-841P-201ENST00000383872 107 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNY4-201ENST00000516507 96 ntBASIC-0.74□□□□□ -2.53
RFX1P22670 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 SNORD115.2-201ENST00000391126 59 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.76□□□□□ -2.53
RFX1P22670 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 SNORD54-201ENST00000459159 67 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 RNU6-194P-201ENST00000363862 105 ntBASIC-0.78□□□□□ -2.53
RFX1P22670 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.78□□□□□ -2.53
RFX1P22670 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 AC097484.2-201ENST00000509147 251 ntBASIC-0.8□□□□□ -2.54
RFX1P22670 MIR3139-201ENST00000579145 76 ntBASIC-0.8□□□□□ -2.54
RFX1P22670 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
RFX1P22670 MIR664B-201ENST00000626756 61 ntBASIC-0.81□□□□□ -2.54
RFX1P22670 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.81□□□□□ -2.54
RFX1P22670 MT-TM-201ENST00000387377 68 ntBASIC-0.82□□□□□ -2.54
RFX1P22670 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.83□□□□□ -2.54
RFX1P22670 FTX_4.1-201ENST00000616291 147 ntBASIC-0.83□□□□□ -2.54
RFX1P22670 RNA5SP405-201ENST00000363059 114 ntBASIC-0.84□□□□□ -2.54
RFX1P22670 SNORD111B-201ENST00000408587 80 ntBASIC-0.86□□□□□ -2.55
RFX1P22670 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
RFX1P22670 RNU6-836P-201ENST00000362920 107 ntBASIC-0.87□□□□□ -2.55
RFX1P22670 RNA5SP224-201ENST00000365069 126 ntBASIC-0.88□□□□□ -2.55
RFX1P22670 RNU6-737P-201ENST00000365370 107 ntBASIC-0.88□□□□□ -2.55
RFX1P22670 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 RNY4P9-201ENST00000363194 97 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 SNORD45C-201ENST00000383893 79 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 RNU6-345P-201ENST00000517001 107 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.91□□□□□ -2.56
RFX1P22670 RNU6-230P-201ENST00000362457 104 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 MIR4748-201ENST00000578076 82 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.93□□□□□ -2.56
RFX1P22670 RNU6-485P-201ENST00000363475 107 ntBASIC-0.95□□□□□ -2.56
RFX1P22670 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 RNU6-854P-201ENST00000364036 107 ntBASIC-0.97□□□□□ -2.56
RFX1P22670 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 MIR656-201ENST00000385224 78 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 SNORD115-45-201ENST00000391078 81 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 MIR5693-201ENST00000577722 73 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.99□□□□□ -2.57
RFX1P22670 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.99□□□□□ -2.57
RFX1P22670 MIR124-1-201ENST00000385275 85 ntBASIC-1□□□□□ -2.57
RFX1P22670 Y_RNA.652-201ENST00000458902 102 ntBASIC-1□□□□□ -2.57
RFX1P22670 RNY4P25-201ENST00000459254 96 ntBASIC-1□□□□□ -2.57
RFX1P22670 AL731768.1-201ENST00000603124 139 ntBASIC-1□□□□□ -2.57
RFX1P22670 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.01□□□□□ -2.57
RFX1P22670 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.01□□□□□ -2.57
RFX1P22670 RNU6-422P-201ENST00000384632 107 ntBASIC-1.02□□□□□ -2.57
RFX1P22670 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 RNU6-803P-201ENST00000516034 102 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 MIR548AH-201ENST00000637109 76 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 RNU6-133P-201ENST00000383989 107 ntBASIC-1.04□□□□□ -2.58
RFX1P22670 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.06□□□□□ -2.58
RFX1P22670 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.08□□□□□ -2.58
RFX1P22670 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.09□□□□□ -2.58
RFX1P22670 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 AL359920.1-201ENST00000618332 176 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.12□□□□□ -2.59
RFX1P22670 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.14□□□□□ -2.59
RFX1P22670 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.15□□□□□ -2.59
RFX1P22670 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.17□□□□□ -2.6
RFX1P22670 MIR509-1-201ENST00000385265 94 ntBASIC-1.18□□□□□ -2.6
RFX1P22670 MIR509-2-201ENST00000390724 91 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms