Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNORD54-201ENST00000459159 67 ntBASIC-1.24□□□□□ -2.61
LIG1P18858 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.24□□□□□ -2.61
LIG1P18858 MIR4770-201ENST00000579149 58 ntBASIC-1.25□□□□□ -2.61
LIG1P18858 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.27□□□□□ -2.61
LIG1P18858 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.27□□□□□ -2.61
LIG1P18858 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.27□□□□□ -2.61
LIG1P18858 FTX_4.1-201ENST00000616291 147 ntBASIC-1.27□□□□□ -2.61
LIG1P18858 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.28□□□□□ -2.61
LIG1P18858 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.28□□□□□ -2.61
LIG1P18858 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.28□□□□□ -2.61
LIG1P18858 RNU6-841P-201ENST00000383872 107 ntBASIC-1.3□□□□□ -2.62
LIG1P18858 snoU13.10-201ENST00000459301 103 ntBASIC-1.32□□□□□ -2.62
LIG1P18858 RNU6-345P-201ENST00000517001 107 ntBASIC-1.32□□□□□ -2.62
LIG1P18858 MIR548W-201ENST00000581970 74 ntBASIC-1.32□□□□□ -2.62
LIG1P18858 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
LIG1P18858 SNORD18.1-201ENST00000363807 70 ntBASIC-1.33□□□□□ -2.62
LIG1P18858 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.34□□□□□ -2.62
LIG1P18858 SNORD111B-201ENST00000408587 80 ntBASIC-1.35□□□□□ -2.63
LIG1P18858 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.38□□□□□ -2.63
LIG1P18858 RNA5SP86-201ENST00000390869 98 ntBASIC-1.38□□□□□ -2.63
LIG1P18858 SNORD45C-201ENST00000383893 79 ntBASIC-1.39□□□□□ -2.63
LIG1P18858 MIR548AM-201ENST00000584298 74 ntBASIC-1.39□□□□□ -2.63
LIG1P18858 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.4□□□□□ -2.63
LIG1P18858 MIR1254-1-201ENST00000408257 97 ntBASIC-1.4□□□□□ -2.63
LIG1P18858 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.41□□□□□ -2.64
LIG1P18858 RNU6-485P-201ENST00000363475 107 ntBASIC-1.42□□□□□ -2.64
LIG1P18858 MIR3139-201ENST00000579145 76 ntBASIC-1.42□□□□□ -2.64
LIG1P18858 MIR656-201ENST00000385224 78 ntBASIC-1.44□□□□□ -2.64
LIG1P18858 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.44□□□□□ -2.64
LIG1P18858 SNORD113-3-201ENST00000364830 72 ntBASIC-1.45□□□□□ -2.64
LIG1P18858 RNU6-133P-201ENST00000383989 107 ntBASIC-1.47□□□□□ -2.64
LIG1P18858 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.47□□□□□ -2.64
LIG1P18858 MIR487B-201ENST00000385021 84 ntBASIC-1.48□□□□□ -2.65
LIG1P18858 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.48□□□□□ -2.65
LIG1P18858 MT-TM-201ENST00000387377 68 ntBASIC-1.5□□□□□ -2.65
LIG1P18858 AC097484.2-201ENST00000509147 251 ntBASIC-1.5□□□□□ -2.65
LIG1P18858 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.5□□□□□ -2.65
LIG1P18858 MIR4756-201ENST00000577874 78 ntBASIC-1.52□□□□□ -2.65
LIG1P18858 MIR664B-201ENST00000626756 61 ntBASIC-1.52□□□□□ -2.65
LIG1P18858 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.53□□□□□ -2.65
LIG1P18858 AC108019.1-201ENST00000512540 175 ntBASIC-1.53□□□□□ -2.65
LIG1P18858 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.56□□□□□ -2.66
LIG1P18858 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.61□□□□□ -2.67
LIG1P18858 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.62□□□□□ -2.67
LIG1P18858 RNA5SP405-201ENST00000363059 114 ntBASIC-1.63□□□□□ -2.67
LIG1P18858 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.63□□□□□ -2.67
LIG1P18858 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.64□□□□□ -2.67
LIG1P18858 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.64□□□□□ -2.67
LIG1P18858 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.66□□□□□ -2.68
LIG1P18858 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.7□□□□□ -2.68
LIG1P18858 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.7□□□□□ -2.68
LIG1P18858 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.71□□□□□ -2.68
LIG1P18858 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.72□□□□□ -2.68
LIG1P18858 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.72□□□□□ -2.68
LIG1P18858 RNU6-894P-201ENST00000517094 105 ntBASIC-1.74□□□□□ -2.69
LIG1P18858 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.79□□□□□ -2.7
LIG1P18858 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.8□□□□□ -2.7
LIG1P18858 RNU6-803P-201ENST00000516034 102 ntBASIC-1.8□□□□□ -2.7
LIG1P18858 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.81□□□□□ -2.7
LIG1P18858 RNU6-194P-201ENST00000363862 105 ntBASIC-1.83□□□□□ -2.7
LIG1P18858 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.83□□□□□ -2.7
LIG1P18858 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.84□□□□□ -2.7
LIG1P18858 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.84□□□□□ -2.7
LIG1P18858 RNU6-854P-201ENST00000364036 107 ntBASIC-1.87□□□□□ -2.71
LIG1P18858 MIR4748-201ENST00000578076 82 ntBASIC-1.89□□□□□ -2.71
LIG1P18858 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.9□□□□□ -2.71
LIG1P18858 RNU6-230P-201ENST00000362457 104 ntBASIC-1.95□□□□□ -2.72
LIG1P18858 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.02□□□□□ -2.73
LIG1P18858 RNU6-422P-201ENST00000384632 107 ntBASIC-2.04□□□□□ -2.74
LIG1P18858 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.04□□□□□ -2.74
LIG1P18858 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
LIG1P18858 AL731768.1-201ENST00000603124 139 ntBASIC-2.06□□□□□ -2.74
LIG1P18858 RNY4P9-201ENST00000363194 97 ntBASIC-2.11□□□□□ -2.75
LIG1P18858 RNU6-737P-201ENST00000365370 107 ntBASIC-2.11□□□□□ -2.75
LIG1P18858 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.11□□□□□ -2.75
LIG1P18858 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.19□□□□□ -2.76
LIG1P18858 RNA5SP106-201ENST00000517274 100 ntBASIC-2.19□□□□□ -2.76
LIG1P18858 MIR548T-201ENST00000408369 74 ntBASIC-2.23□□□□□ -2.77
LIG1P18858 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.23□□□□□ -2.77
LIG1P18858 MIR124-1-201ENST00000385275 85 ntBASIC-2.24□□□□□ -2.77
LIG1P18858 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.26□□□□□ -2.77
LIG1P18858 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.26□□□□□ -2.77
LIG1P18858 RNU6-620P-201ENST00000384017 96 ntBASIC-2.28□□□□□ -2.77
LIG1P18858 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.28□□□□□ -2.77
LIG1P18858 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.29□□□□□ -2.78
LIG1P18858 MIR5693-201ENST00000577722 73 ntBASIC-2.32□□□□□ -2.78
LIG1P18858 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.33□□□□□ -2.78
LIG1P18858 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.33□□□□□ -2.78
LIG1P18858 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.33□□□□□ -2.78
LIG1P18858 AL359920.1-201ENST00000618332 176 ntBASIC-2.33□□□□□ -2.78
LIG1P18858 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.34□□□□□ -2.78
LIG1P18858 MIR509-1-201ENST00000385265 94 ntBASIC-2.34□□□□□ -2.78
LIG1P18858 MIR509-2-201ENST00000390724 91 ntBASIC-2.34□□□□□ -2.78
LIG1P18858 RNY4P10-201ENST00000365571 96 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms