Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.29□□□□□ -2.62
SYPP08247 SNORD115.2-201ENST00000391126 59 ntBASIC-1.3□□□□□ -2.62
SYPP08247 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.32□□□□□ -2.62
SYPP08247 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.33□□□□□ -2.62
SYPP08247 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.34□□□□□ -2.62
SYPP08247 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.34□□□□□ -2.62
SYPP08247 RNU6-724P-201ENST00000390958 105 ntBASIC-1.34□□□□□ -2.62
SYPP08247 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.34□□□□□ -2.62
SYPP08247 MIR3139-201ENST00000579145 76 ntBASIC-1.34□□□□□ -2.62
SYPP08247 MIR664B-201ENST00000626756 61 ntBASIC-1.34□□□□□ -2.62
SYPP08247 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.35□□□□□ -2.63
SYPP08247 RNU6-841P-201ENST00000383872 107 ntBASIC-1.36□□□□□ -2.63
SYPP08247 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.36□□□□□ -2.63
SYPP08247 snoU13.10-201ENST00000459301 103 ntBASIC-1.36□□□□□ -2.63
SYPP08247 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.37□□□□□ -2.63
SYPP08247 MIR487B-201ENST00000385021 84 ntBASIC-1.37□□□□□ -2.63
SYPP08247 AC108019.1-201ENST00000512540 175 ntBASIC-1.37□□□□□ -2.63
SYPP08247 MIR548W-201ENST00000581970 74 ntBASIC-1.37□□□□□ -2.63
SYPP08247 FTX_4.1-201ENST00000616291 147 ntBASIC-1.37□□□□□ -2.63
SYPP08247 RNU6-836P-201ENST00000362920 107 ntBASIC-1.38□□□□□ -2.63
SYPP08247 RNA5SP224-201ENST00000365069 126 ntBASIC-1.38□□□□□ -2.63
SYPP08247 MT-TM-201ENST00000387377 68 ntBASIC-1.38□□□□□ -2.63
SYPP08247 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.38□□□□□ -2.63
SYPP08247 MIR4756-201ENST00000577874 78 ntBASIC-1.39□□□□□ -2.63
SYPP08247 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.4□□□□□ -2.63
SYPP08247 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.4□□□□□ -2.63
SYPP08247 MIR548AM-201ENST00000584298 74 ntBASIC-1.43□□□□□ -2.64
SYPP08247 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.44□□□□□ -2.64
SYPP08247 RNU6-345P-201ENST00000517001 107 ntBASIC-1.44□□□□□ -2.64
SYPP08247 RNA5SP405-201ENST00000363059 114 ntBASIC-1.45□□□□□ -2.64
SYPP08247 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.45□□□□□ -2.64
SYPP08247 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.46□□□□□ -2.64
SYPP08247 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.46□□□□□ -2.64
SYPP08247 MIR1254-1-201ENST00000408257 97 ntBASIC-1.47□□□□□ -2.64
SYPP08247 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.49□□□□□ -2.65
SYPP08247 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.49□□□□□ -2.65
SYPP08247 SNORD113-3-201ENST00000364830 72 ntBASIC-1.5□□□□□ -2.65
SYPP08247 SNORD45C-201ENST00000383893 79 ntBASIC-1.51□□□□□ -2.65
SYPP08247 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.51□□□□□ -2.65
SYPP08247 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.51□□□□□ -2.65
SYPP08247 SNORD111B-201ENST00000408587 80 ntBASIC-1.52□□□□□ -2.65
SYPP08247 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.52□□□□□ -2.65
SYPP08247 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.52□□□□□ -2.65
SYPP08247 RNU6-194P-201ENST00000363862 105 ntBASIC-1.54□□□□□ -2.66
SYPP08247 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.54□□□□□ -2.66
SYPP08247 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.55□□□□□ -2.66
SYPP08247 MIR656-201ENST00000385224 78 ntBASIC-1.57□□□□□ -2.66
SYPP08247 AC097484.2-201ENST00000509147 251 ntBASIC-1.57□□□□□ -2.66
SYPP08247 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.58□□□□□ -2.66
SYPP08247 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.6□□□□□ -2.67
SYPP08247 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.61□□□□□ -2.67
SYPP08247 RNU6-485P-201ENST00000363475 107 ntBASIC-1.62□□□□□ -2.67
SYPP08247 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.62□□□□□ -2.67
SYPP08247 MIR4748-201ENST00000578076 82 ntBASIC-1.66□□□□□ -2.68
SYPP08247 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.7□□□□□ -2.68
SYPP08247 RNU6-803P-201ENST00000516034 102 ntBASIC-1.7□□□□□ -2.68
SYPP08247 RNU6-230P-201ENST00000362457 104 ntBASIC-1.71□□□□□ -2.68
SYPP08247 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.73□□□□□ -2.69
SYPP08247 RNU6-133P-201ENST00000383989 107 ntBASIC-1.73□□□□□ -2.69
SYPP08247 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.74□□□□□ -2.69
SYPP08247 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.74□□□□□ -2.69
SYPP08247 RNY4P9-201ENST00000363194 97 ntBASIC-1.77□□□□□ -2.69
SYPP08247 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.77□□□□□ -2.69
SYPP08247 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.79□□□□□ -2.7
SYPP08247 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
SYPP08247 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.8□□□□□ -2.7
SYPP08247 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.82□□□□□ -2.7
SYPP08247 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.83□□□□□ -2.7
SYPP08247 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.89□□□□□ -2.71
SYPP08247 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.91□□□□□ -2.72
SYPP08247 RNU6-854P-201ENST00000364036 107 ntBASIC-1.93□□□□□ -2.72
SYPP08247 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.93□□□□□ -2.72
SYPP08247 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.96□□□□□ -2.72
SYPP08247 RNU6-894P-201ENST00000517094 105 ntBASIC-2.02□□□□□ -2.73
SYPP08247 RNA5SP106-201ENST00000517274 100 ntBASIC-2.02□□□□□ -2.73
SYPP08247 MIR5693-201ENST00000577722 73 ntBASIC-2.04□□□□□ -2.74
SYPP08247 MIR509-1-201ENST00000385265 94 ntBASIC-2.06□□□□□ -2.74
SYPP08247 MIR509-2-201ENST00000390724 91 ntBASIC-2.06□□□□□ -2.74
SYPP08247 RNY4P25-201ENST00000459254 96 ntBASIC-2.06□□□□□ -2.74
SYPP08247 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.07□□□□□ -2.74
SYPP08247 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.09□□□□□ -2.74
SYPP08247 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.09□□□□□ -2.74
SYPP08247 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.1□□□□□ -2.75
SYPP08247 AL731768.1-201ENST00000603124 139 ntBASIC-2.1□□□□□ -2.75
SYPP08247 RNY4P10-201ENST00000365571 96 ntBASIC-2.12□□□□□ -2.75
SYPP08247 RNU6-737P-201ENST00000365370 107 ntBASIC-2.13□□□□□ -2.75
SYPP08247 RNU6-422P-201ENST00000384632 107 ntBASIC-2.13□□□□□ -2.75
SYPP08247 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.14□□□□□ -2.75
SYPP08247 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.16□□□□□ -2.76
SYPP08247 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.16□□□□□ -2.76
SYPP08247 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.18□□□□□ -2.76
SYPP08247 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.19□□□□□ -2.76
SYPP08247 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.21□□□□□ -2.76
SYPP08247 AL359920.1-201ENST00000618332 176 ntBASIC-2.23□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 256.9 ms