Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC097484.2-201ENST00000509147 251 ntBASIC-0.36□□□□□ -2.47
THBS1P07996 RNU6-737P-201ENST00000365370 107 ntBASIC-0.37□□□□□ -2.47
THBS1P07996 RNU6-620P-201ENST00000384017 96 ntBASIC-0.37□□□□□ -2.47
THBS1P07996 RNU6-226P-201ENST00000363778 107 ntBASIC-0.38□□□□□ -2.47
THBS1P07996 MIR4320-201ENST00000636981 65 ntBASIC-0.38□□□□□ -2.47
THBS1P07996 MIR587-201ENST00000384845 96 ntBASIC-0.39□□□□□ -2.47
THBS1P07996 SCARNA17-201ENST00000516183 144 ntBASIC-0.39□□□□□ -2.47
THBS1P07996 MIR4756-201ENST00000577874 78 ntBASIC-0.39□□□□□ -2.47
THBS1P07996 RNU6-983P-201ENST00000516004 103 ntBASIC-0.4□□□□□ -2.47
THBS1P07996 MIR1207-201ENST00000408249 87 ntBASIC-0.41□□□□□ -2.48
THBS1P07996 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.42□□□□□ -2.48
THBS1P07996 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
THBS1P07996 SNORD115-45-201ENST00000391078 81 ntBASIC-0.42□□□□□ -2.48
THBS1P07996 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.42□□□□□ -2.48
THBS1P07996 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.42□□□□□ -2.48
THBS1P07996 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.42□□□□□ -2.48
THBS1P07996 RNU6-422P-201ENST00000384632 107 ntBASIC-0.43□□□□□ -2.48
THBS1P07996 AC108019.1-201ENST00000512540 175 ntBASIC-0.43□□□□□ -2.48
THBS1P07996 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.44□□□□□ -2.48
THBS1P07996 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.45□□□□□ -2.48
THBS1P07996 MIR4306-201ENST00000583390 91 ntBASIC-0.45□□□□□ -2.48
THBS1P07996 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.46□□□□□ -2.48
THBS1P07996 MIR5591-201ENST00000578248 65 ntBASIC-0.46□□□□□ -2.48
THBS1P07996 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.47□□□□□ -2.48
THBS1P07996 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.47□□□□□ -2.48
THBS1P07996 MIR4324-201ENST00000584846 72 ntBASIC-0.47□□□□□ -2.48
THBS1P07996 SNORD114-3-201ENST00000364969 75 ntBASIC-0.49□□□□□ -2.49
THBS1P07996 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.49□□□□□ -2.49
THBS1P07996 AL731768.1-201ENST00000603124 139 ntBASIC-0.49□□□□□ -2.49
THBS1P07996 RNU6-10P-201ENST00000384036 107 ntBASIC-0.5□□□□□ -2.49
THBS1P07996 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.5□□□□□ -2.49
THBS1P07996 MIR3115-201ENST00000577915 68 ntBASIC-0.5□□□□□ -2.49
THBS1P07996 HLA-S-202ENST00000425174 53 ntBASIC-0.52□□□□□ -2.49
THBS1P07996 MIR6738-201ENST00000619620 64 ntBASIC-0.52□□□□□ -2.49
THBS1P07996 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.53□□□□□ -2.49
THBS1P07996 RNU6-118P-201ENST00000516552 102 ntBASIC-0.53□□□□□ -2.49
THBS1P07996 SNORD18.1-201ENST00000363807 70 ntBASIC-0.54□□□□□ -2.5
THBS1P07996 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.54□□□□□ -2.5
THBS1P07996 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.54□□□□□ -2.5
THBS1P07996 MIR4748-201ENST00000578076 82 ntBASIC-0.55□□□□□ -2.5
THBS1P07996 MIR4770-201ENST00000579149 58 ntBASIC-0.55□□□□□ -2.5
THBS1P07996 MIR664B-201ENST00000626756 61 ntBASIC-0.55□□□□□ -2.5
THBS1P07996 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.56□□□□□ -2.5
THBS1P07996 AL359920.1-201ENST00000618332 176 ntBASIC-0.59□□□□□ -2.5
THBS1P07996 MIR365A-201ENST00000362260 87 ntBASIC-0.6□□□□□ -2.51
THBS1P07996 RNA5SP405-201ENST00000363059 114 ntBASIC-0.6□□□□□ -2.51
THBS1P07996 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.6□□□□□ -2.51
THBS1P07996 RNA5SP461-201ENST00000516451 104 ntBASIC-0.6□□□□□ -2.51
THBS1P07996 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.61□□□□□ -2.51
THBS1P07996 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.62□□□□□ -2.51
THBS1P07996 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.62□□□□□ -2.51
THBS1P07996 RNU6-892P-201ENST00000410335 99 ntBASIC-0.62□□□□□ -2.51
THBS1P07996 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.63□□□□□ -2.51
THBS1P07996 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.63□□□□□ -2.51
THBS1P07996 RNU6-194P-201ENST00000363862 105 ntBASIC-0.63□□□□□ -2.51
THBS1P07996 RNU6-627P-201ENST00000364032 102 ntBASIC-0.64□□□□□ -2.51
THBS1P07996 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.64□□□□□ -2.51
THBS1P07996 RNA5SP449-201ENST00000516871 130 ntBASIC-0.64□□□□□ -2.51
THBS1P07996 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
THBS1P07996 MIR5693-201ENST00000577722 73 ntBASIC-0.65□□□□□ -2.51
THBS1P07996 MIR4441-201ENST00000582623 100 ntBASIC-0.65□□□□□ -2.51
THBS1P07996 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.65□□□□□ -2.51
THBS1P07996 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.66□□□□□ -2.52
THBS1P07996 RNY4P9-201ENST00000363194 97 ntBASIC-0.67□□□□□ -2.52
THBS1P07996 RNY4P27-201ENST00000363341 96 ntBASIC-0.67□□□□□ -2.52
THBS1P07996 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.68□□□□□ -2.52
THBS1P07996 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.68□□□□□ -2.52
THBS1P07996 MIR1285-2-201ENST00000408311 88 ntBASIC-0.68□□□□□ -2.52
THBS1P07996 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.68□□□□□ -2.52
THBS1P07996 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 RNY4P25-201ENST00000459254 96 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 RNA5SP180-201ENST00000516181 101 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 MIR3139-201ENST00000579145 76 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 MIR3165-201ENST00000579874 75 ntBASIC-0.69□□□□□ -2.52
THBS1P07996 MIR1246-201ENST00000636535 73 ntBASIC-0.7□□□□□ -2.52
THBS1P07996 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.71□□□□□ -2.52
THBS1P07996 RNU6-230P-201ENST00000362457 104 ntBASIC-0.72□□□□□ -2.52
THBS1P07996 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.73□□□□□ -2.53
THBS1P07996 SNORD114-13-201ENST00000364377 74 ntBASIC-0.75□□□□□ -2.53
THBS1P07996 MT-TM-201ENST00000387377 68 ntBASIC-0.75□□□□□ -2.53
THBS1P07996 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.76□□□□□ -2.53
THBS1P07996 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.77□□□□□ -2.53
THBS1P07996 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.77□□□□□ -2.53
THBS1P07996 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.78□□□□□ -2.53
THBS1P07996 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.79□□□□□ -2.54
THBS1P07996 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.79□□□□□ -2.54
THBS1P07996 RNU4-85P-201ENST00000364675 123 ntBASIC-0.79□□□□□ -2.54
THBS1P07996 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.82□□□□□ -2.54
THBS1P07996 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.83□□□□□ -2.54
THBS1P07996 RNU6-665P-201ENST00000384639 107 ntBASIC-0.87□□□□□ -2.55
THBS1P07996 RNY4P7-201ENST00000364600 96 ntBASIC-0.89□□□□□ -2.55
THBS1P07996 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.89□□□□□ -2.55
THBS1P07996 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.91□□□□□ -2.56
THBS1P07996 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.97□□□□□ -2.56
THBS1P07996 MIR496-201ENST00000385226 102 ntBASIC-0.98□□□□□ -2.57
THBS1P07996 RNU6-1247P-201ENST00000516622 98 ntBASIC-1□□□□□ -2.57
THBS1P07996 RNU6-119P-201ENST00000364882 107 ntBASIC-1.01□□□□□ -2.57
THBS1P07996 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.01□□□□□ -2.57
THBS1P07996 MIR509-1-201ENST00000385265 94 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms