Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SCARNA17-201ENST00000516183 144 ntBASIC-0.56□□□□□ -2.5
PAX4O43316 MIR5589-201ENST00000579442 60 ntBASIC-0.56□□□□□ -2.5
PAX4O43316 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
PAX4O43316 RNY4P9-201ENST00000363194 97 ntBASIC-0.58□□□□□ -2.5
PAX4O43316 MIR5693-201ENST00000577722 73 ntBASIC-0.58□□□□□ -2.5
PAX4O43316 RNY4P25-201ENST00000459254 96 ntBASIC-0.59□□□□□ -2.5
PAX4O43316 MIR4636-201ENST00000582271 80 ntBASIC-0.6□□□□□ -2.51
PAX4O43316 MIR4493-201ENST00000584016 73 ntBASIC-0.6□□□□□ -2.51
PAX4O43316 MIR664B-201ENST00000626756 61 ntBASIC-0.61□□□□□ -2.51
PAX4O43316 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.62□□□□□ -2.51
PAX4O43316 MIR4770-201ENST00000579149 58 ntBASIC-0.62□□□□□ -2.51
PAX4O43316 SNORD18.1-201ENST00000363807 70 ntBASIC-0.63□□□□□ -2.51
PAX4O43316 RNA5SP451-201ENST00000410588 110 ntBASIC-0.63□□□□□ -2.51
PAX4O43316 HLA-S-202ENST00000425174 53 ntBASIC-0.63□□□□□ -2.51
PAX4O43316 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.64□□□□□ -2.51
PAX4O43316 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.65□□□□□ -2.51
PAX4O43316 RNA5SP405-201ENST00000363059 114 ntBASIC-0.67□□□□□ -2.52
PAX4O43316 RNU6-194P-201ENST00000363862 105 ntBASIC-0.67□□□□□ -2.52
PAX4O43316 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.67□□□□□ -2.52
PAX4O43316 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
PAX4O43316 SNORD114-13-201ENST00000364377 74 ntBASIC-0.68□□□□□ -2.52
PAX4O43316 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.68□□□□□ -2.52
PAX4O43316 MIR604-201ENST00000384880 94 ntBASIC-0.68□□□□□ -2.52
PAX4O43316 RNU6-230P-201ENST00000362457 104 ntBASIC-0.69□□□□□ -2.52
PAX4O43316 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
PAX4O43316 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.69□□□□□ -2.52
PAX4O43316 MIR4324-201ENST00000584846 72 ntBASIC-0.7□□□□□ -2.52
PAX4O43316 RNU6-758P-201ENST00000516292 89 ntBASIC-0.72□□□□□ -2.52
PAX4O43316 MIR3115-201ENST00000577915 68 ntBASIC-0.72□□□□□ -2.52
PAX4O43316 RNA5SP368-201ENST00000364298 116 ntBASIC-0.73□□□□□ -2.53
PAX4O43316 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.74□□□□□ -2.53
PAX4O43316 MIR224-201ENST00000384889 81 ntBASIC-0.74□□□□□ -2.53
PAX4O43316 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.74□□□□□ -2.53
PAX4O43316 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.76□□□□□ -2.53
PAX4O43316 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.76□□□□□ -2.53
PAX4O43316 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
PAX4O43316 RNU6-10P-201ENST00000384036 107 ntBASIC-0.78□□□□□ -2.53
PAX4O43316 SNORD95.1-201ENST00000364099 68 ntBASIC-0.79□□□□□ -2.54
PAX4O43316 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.79□□□□□ -2.54
PAX4O43316 MIR6738-201ENST00000619620 64 ntBASIC-0.83□□□□□ -2.54
PAX4O43316 RNA5SP25-201ENST00000410815 110 ntBASIC-0.84□□□□□ -2.54
PAX4O43316 MIR3139-201ENST00000579145 76 ntBASIC-0.85□□□□□ -2.55
PAX4O43316 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.85□□□□□ -2.55
PAX4O43316 RNU6-665P-201ENST00000384639 107 ntBASIC-0.86□□□□□ -2.55
PAX4O43316 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.88□□□□□ -2.55
PAX4O43316 RNY4P19-201ENST00000362530 96 ntBASIC-0.89□□□□□ -2.55
PAX4O43316 MIR6086-201ENST00000638065 55 ntBASIC-0.89□□□□□ -2.55
PAX4O43316 MIR548AX-201ENST00000580117 73 ntBASIC-0.9□□□□□ -2.55
PAX4O43316 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.92□□□□□ -2.56
PAX4O43316 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.93□□□□□ -2.56
PAX4O43316 RNA5SP461-201ENST00000516451 104 ntBASIC-0.93□□□□□ -2.56
PAX4O43316 SNORD114-15-201ENST00000364687 72 ntBASIC-0.94□□□□□ -2.56
PAX4O43316 MT-TM-201ENST00000387377 68 ntBASIC-0.94□□□□□ -2.56
PAX4O43316 MIR3165-201ENST00000579874 75 ntBASIC-0.95□□□□□ -2.56
PAX4O43316 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.95□□□□□ -2.56
PAX4O43316 snoU13.19-201ENST00000459148 104 ntBASIC-0.99□□□□□ -2.57
PAX4O43316 MIR1246-201ENST00000636535 73 ntBASIC-0.99□□□□□ -2.57
PAX4O43316 RNU6-30P-201ENST00000384561 107 ntBASIC-1□□□□□ -2.57
PAX4O43316 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.01□□□□□ -2.57
PAX4O43316 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.06□□□□□ -2.58
PAX4O43316 RNA5SP476-201ENST00000516613 103 ntBASIC-1.06□□□□□ -2.58
PAX4O43316 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.09□□□□□ -2.58
PAX4O43316 MIR587-201ENST00000384845 96 ntBASIC-1.1□□□□□ -2.59
PAX4O43316 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.12□□□□□ -2.59
PAX4O43316 HAR1A.1-201ENST00000459583 118 ntBASIC-1.12□□□□□ -2.59
PAX4O43316 RNU6-916P-201ENST00000516088 109 ntBASIC-1.15□□□□□ -2.59
PAX4O43316 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.18□□□□□ -2.6
PAX4O43316 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.19□□□□□ -2.6
PAX4O43316 MIR509-1-201ENST00000385265 94 ntBASIC-1.2□□□□□ -2.6
PAX4O43316 MIR509-2-201ENST00000390724 91 ntBASIC-1.2□□□□□ -2.6
PAX4O43316 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.21□□□□□ -2.6
PAX4O43316 MIR363-201ENST00000384840 75 ntBASIC-1.23□□□□□ -2.61
PAX4O43316 MIR409-201ENST00000362237 79 ntBASIC-1.24□□□□□ -2.61
PAX4O43316 MIR4320-201ENST00000636981 65 ntBASIC-1.24□□□□□ -2.61
PAX4O43316 RNY4P10-201ENST00000365571 96 ntBASIC-1.25□□□□□ -2.61
PAX4O43316 RNA5SP180-201ENST00000516181 101 ntBASIC-1.25□□□□□ -2.61
PAX4O43316 RNA5SP106-201ENST00000517274 100 ntBASIC-1.28□□□□□ -2.61
PAX4O43316 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
PAX4O43316 RNA5SP266-201ENST00000410273 108 ntBASIC-1.31□□□□□ -2.62
PAX4O43316 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.37□□□□□ -2.63
PAX4O43316 MIR1285-2-201ENST00000408311 88 ntBASIC-1.38□□□□□ -2.63
PAX4O43316 RNY4P13-201ENST00000384284 96 ntBASIC-1.4□□□□□ -2.63
PAX4O43316 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.4□□□□□ -2.63
PAX4O43316 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.4□□□□□ -2.63
PAX4O43316 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.42□□□□□ -2.64
PAX4O43316 MIR198-201ENST00000637333 62 ntBASIC-1.43□□□□□ -2.64
PAX4O43316 MIR496-201ENST00000385226 102 ntBASIC-1.45□□□□□ -2.64
PAX4O43316 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.45□□□□□ -2.64
PAX4O43316 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.46□□□□□ -2.64
PAX4O43316 MIR601-201ENST00000385256 79 ntBASIC-1.5□□□□□ -2.65
PAX4O43316 RNA5SP331-201ENST00000364986 107 ntBASIC-1.51□□□□□ -2.65
PAX4O43316 SNX3P1X-201ENST00000414887 175 ntBASIC-1.51□□□□□ -2.65
PAX4O43316 RNU6-803P-201ENST00000516034 102 ntBASIC-1.52□□□□□ -2.65
PAX4O43316 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.54□□□□□ -2.66
PAX4O43316 AL627230.5-201ENST00000619807 58 ntBASIC-1.55□□□□□ -2.66
PAX4O43316 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.56□□□□□ -2.66
PAX4O43316 RNA5SP93-201ENST00000362525 114 ntBASIC-1.57□□□□□ -2.66
PAX4O43316 MIR4441-201ENST00000582623 100 ntBASIC-1.57□□□□□ -2.66
PAX4O43316 MIR365A-201ENST00000362260 87 ntBASIC-1.59□□□□□ -2.66
PAX4O43316 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms