Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 Y_RNA.610-201ENST00000410681 103 ntBASIC0.07□□□□□ -2.4
CCDC61Q9Y6R9 MIR6818-201ENST00000621576 65 ntBASIC0.07□□□□□ -2.4
CCDC61Q9Y6R9 MIR147A-201ENST00000385079 72 ntBASIC0.06□□□□□ -2.4
CCDC61Q9Y6R9 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
CCDC61Q9Y6R9 MIR4723-201ENST00000585070 81 ntBASIC0.06□□□□□ -2.4
CCDC61Q9Y6R9 MIR409-201ENST00000362237 79 ntBASIC0.05□□□□□ -2.4
CCDC61Q9Y6R9 RPS29P8-201ENST00000445109 171 ntBASIC0.05□□□□□ -2.4
CCDC61Q9Y6R9 MIR8064-201ENST00000612863 90 ntBASIC0.05□□□□□ -2.4
CCDC61Q9Y6R9 RNU6-164P-201ENST00000364604 103 ntBASIC0.04□□□□□ -2.4
CCDC61Q9Y6R9 AL500527.2-201ENST00000454105 95 ntBASIC0.04□□□□□ -2.4
CCDC61Q9Y6R9 MIR224-201ENST00000384889 81 ntBASIC0.03□□□□□ -2.4
CCDC61Q9Y6R9 MIR4493-201ENST00000584016 73 ntBASIC0.03□□□□□ -2.4
CCDC61Q9Y6R9 Y_RNA.468-201ENST00000384298 102 ntBASIC0.02□□□□□ -2.41
CCDC61Q9Y6R9 SNX3P1X-201ENST00000414887 175 ntBASIC0.02□□□□□ -2.41
CCDC61Q9Y6R9 U4.2-201ENST00000618561 85 ntBASIC0.02□□□□□ -2.41
CCDC61Q9Y6R9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CCDC61Q9Y6R9 SNORD19B.1-201ENST00000630615 80 ntBASIC0.01□□□□□ -2.41
CCDC61Q9Y6R9 RNU6-431P-201ENST00000383874 107 ntBASIC0□□□□□ -2.41
CCDC61Q9Y6R9 RNU4-63P-201ENST00000411313 118 ntBASIC0□□□□□ -2.41
CCDC61Q9Y6R9 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.01□□□□□ -2.41
CCDC61Q9Y6R9 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.01□□□□□ -2.41
CCDC61Q9Y6R9 MIR1254-1-201ENST00000408257 97 ntBASIC-0.01□□□□□ -2.41
CCDC61Q9Y6R9 MIR101-1-201ENST00000362265 75 ntBASIC-0.03□□□□□ -2.41
CCDC61Q9Y6R9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.03□□□□□ -2.41
CCDC61Q9Y6R9 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.03□□□□□ -2.41
CCDC61Q9Y6R9 MIR214-201ENST00000385214 110 ntBASIC-0.03□□□□□ -2.41
CCDC61Q9Y6R9 SNORD64-201ENST00000386683 67 ntBASIC-0.03□□□□□ -2.41
CCDC61Q9Y6R9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.04□□□□□ -2.42
CCDC61Q9Y6R9 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.06□□□□□ -2.42
CCDC61Q9Y6R9 RNA5SP461-201ENST00000516451 104 ntBASIC-0.06□□□□□ -2.42
CCDC61Q9Y6R9 snoU83B.1-201ENST00000517136 88 ntBASIC-0.06□□□□□ -2.42
CCDC61Q9Y6R9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.08□□□□□ -2.42
CCDC61Q9Y6R9 SNORA3B-201ENST00000391305 131 ntBASIC-0.08□□□□□ -2.42
CCDC61Q9Y6R9 MIR601-201ENST00000385256 79 ntBASIC-0.1□□□□□ -2.43
CCDC61Q9Y6R9 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.11□□□□□ -2.43
CCDC61Q9Y6R9 MIR4320-201ENST00000636981 65 ntBASIC-0.12□□□□□ -2.43
CCDC61Q9Y6R9 MIR548H1-201ENST00000408610 102 ntBASIC-0.13□□□□□ -2.43
CCDC61Q9Y6R9 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.13□□□□□ -2.43
CCDC61Q9Y6R9 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.14□□□□□ -2.43
CCDC61Q9Y6R9 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.14□□□□□ -2.43
CCDC61Q9Y6R9 MIR548AX-201ENST00000580117 73 ntBASIC-0.14□□□□□ -2.43
CCDC61Q9Y6R9 MIR1207-201ENST00000408249 87 ntBASIC-0.15□□□□□ -2.43
CCDC61Q9Y6R9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 MIR382-201ENST00000637119 76 ntBASIC-0.16□□□□□ -2.44
CCDC61Q9Y6R9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.17□□□□□ -2.44
CCDC61Q9Y6R9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.17□□□□□ -2.44
CCDC61Q9Y6R9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.18□□□□□ -2.44
CCDC61Q9Y6R9 MIR4324-201ENST00000584846 72 ntBASIC-0.18□□□□□ -2.44
CCDC61Q9Y6R9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.18□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.19□□□□□ -2.44
CCDC61Q9Y6R9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.19□□□□□ -2.44
CCDC61Q9Y6R9 RNU6-400P-201ENST00000391173 106 ntBASIC-0.19□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.19□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.2□□□□□ -2.44
CCDC61Q9Y6R9 MIR587-201ENST00000384845 96 ntBASIC-0.2□□□□□ -2.44
CCDC61Q9Y6R9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.2□□□□□ -2.44
CCDC61Q9Y6R9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.21□□□□□ -2.44
CCDC61Q9Y6R9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.21□□□□□ -2.44
CCDC61Q9Y6R9 MIR6738-201ENST00000619620 64 ntBASIC-0.22□□□□□ -2.44
CCDC61Q9Y6R9 MIR378F-201ENST00000578143 78 ntBASIC-0.23□□□□□ -2.45
CCDC61Q9Y6R9 SNORD114-3-201ENST00000364969 75 ntBASIC-0.24□□□□□ -2.45
CCDC61Q9Y6R9 RNY4P27-201ENST00000363341 96 ntBASIC-0.25□□□□□ -2.45
CCDC61Q9Y6R9 SNORD14C-201ENST00000365382 88 ntBASIC-0.25□□□□□ -2.45
CCDC61Q9Y6R9 MIR6874-201ENST00000635894 71 ntBASIC-0.25□□□□□ -2.45
CCDC61Q9Y6R9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.26□□□□□ -2.45
CCDC61Q9Y6R9 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
CCDC61Q9Y6R9 SCARNA17-201ENST00000516183 144 ntBASIC-0.27□□□□□ -2.45
CCDC61Q9Y6R9 MIR3115-201ENST00000577915 68 ntBASIC-0.27□□□□□ -2.45
CCDC61Q9Y6R9 MIR4436A-201ENST00000585278 85 ntBASIC-0.27□□□□□ -2.45
CCDC61Q9Y6R9 SNORD126-201ENST00000459475 77 ntBASIC-0.28□□□□□ -2.45
CCDC61Q9Y6R9 AC091912.2-201ENST00000624798 167 ntBASIC-0.28□□□□□ -2.45
CCDC61Q9Y6R9 MT-TQ-201ENST00000387372 72 ntBASIC-0.29□□□□□ -2.46
CCDC61Q9Y6R9 RNU7-134P-201ENST00000458997 64 ntBASIC-0.29□□□□□ -2.46
CCDC61Q9Y6R9 MIR365A-201ENST00000362260 87 ntBASIC-0.3□□□□□ -2.46
CCDC61Q9Y6R9 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.3□□□□□ -2.46
CCDC61Q9Y6R9 MIR198-201ENST00000637333 62 ntBASIC-0.3□□□□□ -2.46
CCDC61Q9Y6R9 RNA5SP180-201ENST00000516181 101 ntBASIC-0.31□□□□□ -2.46
CCDC61Q9Y6R9 RNU6-620P-201ENST00000384017 96 ntBASIC-0.32□□□□□ -2.46
CCDC61Q9Y6R9 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.32□□□□□ -2.46
CCDC61Q9Y6R9 MIR1285-2-201ENST00000408311 88 ntBASIC-0.32□□□□□ -2.46
CCDC61Q9Y6R9 SNORD113-3-201ENST00000364830 72 ntBASIC-0.34□□□□□ -2.46
CCDC61Q9Y6R9 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.34□□□□□ -2.46
CCDC61Q9Y6R9 MIR4441-201ENST00000582623 100 ntBASIC-0.34□□□□□ -2.46
CCDC61Q9Y6R9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.34□□□□□ -2.46
CCDC61Q9Y6R9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.34□□□□□ -2.46
CCDC61Q9Y6R9 snoU13.10-201ENST00000459301 103 ntBASIC-0.35□□□□□ -2.47
CCDC61Q9Y6R9 MIR3123-201ENST00000583417 75 ntBASIC-0.35□□□□□ -2.47
CCDC61Q9Y6R9 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.37□□□□□ -2.47
CCDC61Q9Y6R9 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.37□□□□□ -2.47
CCDC61Q9Y6R9 MIR196A1-201ENST00000388006 70 ntBASIC-0.38□□□□□ -2.47
CCDC61Q9Y6R9 RNU6-226P-201ENST00000363778 107 ntBASIC-0.4□□□□□ -2.47
CCDC61Q9Y6R9 MIR496-201ENST00000385226 102 ntBASIC-0.4□□□□□ -2.47
CCDC61Q9Y6R9 MIR548W-201ENST00000581970 74 ntBASIC-0.4□□□□□ -2.47
CCDC61Q9Y6R9 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.43□□□□□ -2.48
CCDC61Q9Y6R9 RNU6-422P-201ENST00000384632 107 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms