Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SNORA18.1-201ENST00000363418 128 ntBASIC0.51□□□□□ -2.33
RNF39Q9H2S5 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
RNF39Q9H2S5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
RNF39Q9H2S5 MIR382-201ENST00000637119 76 ntBASIC0.48□□□□□ -2.33
RNF39Q9H2S5 RNU6-1161P-201ENST00000516176 102 ntBASIC0.46□□□□□ -2.34
RNF39Q9H2S5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
RNF39Q9H2S5 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
RNF39Q9H2S5 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
RNF39Q9H2S5 RNA5SP134-201ENST00000516492 96 ntBASIC0.43□□□□□ -2.34
RNF39Q9H2S5 MIR548AH-201ENST00000637109 76 ntBASIC0.43□□□□□ -2.34
RNF39Q9H2S5 MIR2909-201ENST00000617113 69 ntBASIC0.42□□□□□ -2.34
RNF39Q9H2S5 RNA5SP300-201ENST00000391197 107 ntBASIC0.4□□□□□ -2.35
RNF39Q9H2S5 RNA5SP63-201ENST00000391225 112 ntBASIC0.39□□□□□ -2.35
RNF39Q9H2S5 RNU6-841P-201ENST00000383872 107 ntBASIC0.38□□□□□ -2.35
RNF39Q9H2S5 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
RNF39Q9H2S5 Y_RNA.175-201ENST00000363794 111 ntBASIC0.37□□□□□ -2.35
RNF39Q9H2S5 RNA5SP285-201ENST00000516619 119 ntBASIC0.36□□□□□ -2.35
RNF39Q9H2S5 Y_RNA.137-201ENST00000363455 112 ntBASIC0.35□□□□□ -2.35
RNF39Q9H2S5 HAR1A.1-201ENST00000459583 118 ntBASIC0.34□□□□□ -2.36
RNF39Q9H2S5 RNA5SP476-201ENST00000516613 103 ntBASIC0.34□□□□□ -2.36
RNF39Q9H2S5 MIR1295B-201ENST00000636144 60 ntBASIC0.33□□□□□ -2.36
RNF39Q9H2S5 SNORD4A-201ENST00000459174 72 ntBASIC0.32□□□□□ -2.36
RNF39Q9H2S5 SNORA3B-201ENST00000391305 131 ntBASIC0.31□□□□□ -2.36
RNF39Q9H2S5 MIR4290-201ENST00000583807 95 ntBASIC0.31□□□□□ -2.36
RNF39Q9H2S5 MIR548AM-201ENST00000584298 74 ntBASIC0.31□□□□□ -2.36
RNF39Q9H2S5 AP001180.6-201ENST00000584918 159 ntBASIC0.29□□□□□ -2.36
RNF39Q9H2S5 MIR6086-201ENST00000638065 55 ntBASIC0.29□□□□□ -2.36
RNF39Q9H2S5 MIR6718-201ENST00000616153 80 ntBASIC0.28□□□□□ -2.36
RNF39Q9H2S5 SNORD114-25-201ENST00000363742 72 ntBASIC0.27□□□□□ -2.37
RNF39Q9H2S5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
RNF39Q9H2S5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
RNF39Q9H2S5 Y_RNA.663-201ENST00000516043 101 ntBASIC0.24□□□□□ -2.37
RNF39Q9H2S5 MIR1295A-201ENST00000408463 79 ntBASIC0.21□□□□□ -2.38
RNF39Q9H2S5 Y_RNA.103-201ENST00000363171 102 ntBASIC0.2□□□□□ -2.38
RNF39Q9H2S5 MIR4802-201ENST00000581881 80 ntBASIC0.2□□□□□ -2.38
RNF39Q9H2S5 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
RNF39Q9H2S5 MIR6759-201ENST00000638110 65 ntBASIC0.19□□□□□ -2.38
RNF39Q9H2S5 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
RNF39Q9H2S5 MIR4636-201ENST00000582271 80 ntBASIC0.18□□□□□ -2.38
RNF39Q9H2S5 MIR5190-201ENST00000581537 80 ntBASIC0.17□□□□□ -2.38
RNF39Q9H2S5 SNORD114-14-201ENST00000362723 75 ntBASIC0.16□□□□□ -2.38
RNF39Q9H2S5 MIR4436A-201ENST00000585278 85 ntBASIC0.15□□□□□ -2.39
RNF39Q9H2S5 MIR5589-201ENST00000579442 60 ntBASIC0.14□□□□□ -2.39
RNF39Q9H2S5 AL731768.1-201ENST00000603124 139 ntBASIC0.14□□□□□ -2.39
RNF39Q9H2S5 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
RNF39Q9H2S5 Y_RNA.696-201ENST00000516725 107 ntBASIC0.11□□□□□ -2.39
RNF39Q9H2S5 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
RNF39Q9H2S5 Y_RNA.185-201ENST00000363894 100 ntBASIC0.1□□□□□ -2.39
RNF39Q9H2S5 RNU6-30P-201ENST00000384561 107 ntBASIC0.1□□□□□ -2.39
RNF39Q9H2S5 SNORD115-45-201ENST00000391078 81 ntBASIC0.1□□□□□ -2.39
RNF39Q9H2S5 RNA5SP368-201ENST00000364298 116 ntBASIC0.09□□□□□ -2.4
RNF39Q9H2S5 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
RNF39Q9H2S5 Y_RNA.391-201ENST00000383933 94 ntBASIC0.05□□□□□ -2.4
RNF39Q9H2S5 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
RNF39Q9H2S5 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
RNF39Q9H2S5 SNORD114-31-201ENST00000363219 75 ntBASIC0.03□□□□□ -2.4
RNF39Q9H2S5 snoU13.19-201ENST00000459148 104 ntBASIC0.02□□□□□ -2.41
RNF39Q9H2S5 IGLVI-20-201ENST00000519296 130 ntBASIC0.02□□□□□ -2.41
RNF39Q9H2S5 MIR8485-201ENST00000401372 91 ntBASIC0□□□□□ -2.41
RNF39Q9H2S5 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0□□□□□ -2.41
RNF39Q9H2S5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.01□□□□□ -2.41
RNF39Q9H2S5 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.01□□□□□ -2.41
RNF39Q9H2S5 AL627230.5-201ENST00000619807 58 ntBASIC-0.01□□□□□ -2.41
RNF39Q9H2S5 RNU6-226P-201ENST00000363778 107 ntBASIC-0.02□□□□□ -2.41
RNF39Q9H2S5 MIR196A2-201ENST00000385189 110 ntBASIC-0.02□□□□□ -2.41
RNF39Q9H2S5 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.03□□□□□ -2.41
RNF39Q9H2S5 MIR4493-201ENST00000584016 73 ntBASIC-0.03□□□□□ -2.41
RNF39Q9H2S5 MIR6502-201ENST00000617296 76 ntBASIC-0.03□□□□□ -2.41
RNF39Q9H2S5 MIR604-201ENST00000384880 94 ntBASIC-0.05□□□□□ -2.42
RNF39Q9H2S5 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
RNF39Q9H2S5 RNA5SP25-201ENST00000410815 110 ntBASIC-0.06□□□□□ -2.42
RNF39Q9H2S5 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.07□□□□□ -2.42
RNF39Q9H2S5 AL359920.1-201ENST00000618332 176 ntBASIC-0.07□□□□□ -2.42
RNF39Q9H2S5 MIR101-1-201ENST00000362265 75 ntBASIC-0.08□□□□□ -2.42
RNF39Q9H2S5 SNORD126-201ENST00000459475 77 ntBASIC-0.08□□□□□ -2.42
RNF39Q9H2S5 MIR409-201ENST00000362237 79 ntBASIC-0.11□□□□□ -2.43
RNF39Q9H2S5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.11□□□□□ -2.43
RNF39Q9H2S5 RNA5SP331-201ENST00000364986 107 ntBASIC-0.11□□□□□ -2.43
RNF39Q9H2S5 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.11□□□□□ -2.43
RNF39Q9H2S5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.12□□□□□ -2.43
RNF39Q9H2S5 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.12□□□□□ -2.43
RNF39Q9H2S5 SNORD114-15-201ENST00000364687 72 ntBASIC-0.12□□□□□ -2.43
RNF39Q9H2S5 RNU4-85P-201ENST00000364675 123 ntBASIC-0.13□□□□□ -2.43
RNF39Q9H2S5 SNORD14C-201ENST00000365382 88 ntBASIC-0.13□□□□□ -2.43
RNF39Q9H2S5 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.14□□□□□ -2.43
RNF39Q9H2S5 RNA5SP266-201ENST00000410273 108 ntBASIC-0.14□□□□□ -2.43
RNF39Q9H2S5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.15□□□□□ -2.43
RNF39Q9H2S5 MIR487B-201ENST00000385021 84 ntBASIC-0.16□□□□□ -2.44
RNF39Q9H2S5 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.17□□□□□ -2.44
RNF39Q9H2S5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 RPS29P8-201ENST00000445109 171 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 MIR8064-201ENST00000612863 90 ntBASIC-0.18□□□□□ -2.44
RNF39Q9H2S5 MIR548AX-201ENST00000580117 73 ntBASIC-0.19□□□□□ -2.44
RNF39Q9H2S5 MIR224-201ENST00000384889 81 ntBASIC-0.2□□□□□ -2.44
RNF39Q9H2S5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.21□□□□□ -2.44
RNF39Q9H2S5 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.22□□□□□ -2.44
RNF39Q9H2S5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms