Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 AP000533.3-201ENST00000447704 118 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 AC011195.1-201ENST00000578177 177 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3973-201ENST00000579824 107 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORD114-21-201ENST00000606412 72 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR7974-201ENST00000615835 79 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR6818-201ENST00000621576 65 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR6514-201ENST00000622549 70 ntBASIC0.39□□□□□ -2.35
KRTAP4-3Q9BYR4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR373-201ENST00000362273 69 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 Y_RNA.189-201ENST00000363959 112 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP368-201ENST00000364298 116 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR518B-201ENST00000385127 83 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 IGLVI-20-201ENST00000519296 130 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR4698-201ENST00000577795 80 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3115-201ENST00000577915 68 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR4713-201ENST00000582691 75 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR4658-201ENST00000584344 65 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR6788-201ENST00000618842 66 ntBASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.38□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP276-201ENST00000362580 94 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR193B-201ENST00000384907 83 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR222-201ENST00000384992 110 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORD99-201ENST00000408612 74 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR548J-201ENST00000408833 112 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 AC244250.2-201ENST00000418731 148 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR1273G-201ENST00000577677 100 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR378F-201ENST00000578143 78 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR4520-1-201ENST00000582609 70 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR4295-201ENST00000585286 85 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR198-201ENST00000637333 62 ntBASIC0.37□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR30A-201ENST00000385092 71 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 RNU6-56P-201ENST00000516986 93 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 CR383656.4-201ENST00000546909 122 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3179-1-201ENST00000578940 84 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3179-2-201ENST00000579107 84 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3179-3-201ENST00000579566 84 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3179-4-201ENST00000617599 84 ntBASIC0.36□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORA3A-201ENST00000364113 130 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP255-201ENST00000516370 107 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 AP001180.6-201ENST00000584918 159 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 AL590095.2-201ENST00000604136 117 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR3666-201ENST00000607845 111 ntBASIC0.35□□□□□ -2.35
KRTAP4-3Q9BYR4 MIR655-201ENST00000362159 97 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU4-38P-201ENST00000364472 129 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6-431P-201ENST00000383874 107 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR200A-201ENST00000384875 90 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR5591-201ENST00000578248 65 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR5694-201ENST00000581190 76 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR924-201ENST00000638017 53 ntBASIC0.34□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 Y_RNA.583-201ENST00000391033 113 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU1-78P-201ENST00000391248 165 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR892B-201ENST00000401279 77 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 Z96811.1-201ENST00000445880 108 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR5000-201ENST00000577717 103 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR3681-201ENST00000580089 72 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4324-201ENST00000584846 72 ntBASIC0.33□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR147A-201ENST00000385079 72 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR196A2-201ENST00000385189 110 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6-180P-201ENST00000516697 61 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 RNA5SP66-201ENST00000517178 101 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4422-201ENST00000581938 83 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR382-201ENST00000637119 76 ntBASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.32□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD114-15-201ENST00000364687 72 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR587-201ENST00000384845 96 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR618-201ENST00000385287 98 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD64-201ENST00000386683 67 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 RNA5SP163-201ENST00000410304 99 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 SCARNA17-201ENST00000516183 144 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4299-201ENST00000577899 72 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4770-201ENST00000579149 58 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4714-201ENST00000580728 77 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4636-201ENST00000582271 80 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 AC093726.3-201ENST00000637588 150 ntBASIC0.31□□□□□ -2.36
KRTAP4-3Q9BYR4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR548H2-201ENST00000408874 88 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 AL356379.1-201ENST00000414105 126 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 HLA-S-202ENST00000425174 53 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 CYP3A137P-201ENST00000562436 69 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR3198-2-201ENST00000577868 80 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR6738-201ENST00000619620 64 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR6835-201ENST00000621552 64 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms