Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU6-930P-201ENST00000390938 100 ntBASIC-0.92□□□□□ -2.56
RFT1Q96AA3 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.92□□□□□ -2.56
RFT1Q96AA3 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.93□□□□□ -2.56
RFT1Q96AA3 MIR487B-201ENST00000385021 84 ntBASIC-0.93□□□□□ -2.56
RFT1Q96AA3 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.93□□□□□ -2.56
RFT1Q96AA3 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.94□□□□□ -2.56
RFT1Q96AA3 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.94□□□□□ -2.56
RFT1Q96AA3 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.94□□□□□ -2.56
RFT1Q96AA3 RNU6-987P-201ENST00000384759 104 ntBASIC-0.95□□□□□ -2.56
RFT1Q96AA3 MIR548W-201ENST00000581970 74 ntBASIC-0.95□□□□□ -2.56
RFT1Q96AA3 MIR4324-201ENST00000584846 72 ntBASIC-0.95□□□□□ -2.56
RFT1Q96AA3 RNA5SP86-201ENST00000390869 98 ntBASIC-0.96□□□□□ -2.56
RFT1Q96AA3 RNU4-37P-201ENST00000410214 84 ntBASIC-0.96□□□□□ -2.56
RFT1Q96AA3 MIR6086-201ENST00000638065 55 ntBASIC-0.96□□□□□ -2.56
RFT1Q96AA3 RNU6-912P-201ENST00000363800 104 ntBASIC-0.97□□□□□ -2.56
RFT1Q96AA3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.97□□□□□ -2.56
RFT1Q96AA3 snoU13.10-201ENST00000459301 103 ntBASIC-0.97□□□□□ -2.56
RFT1Q96AA3 RNU6-176P-201ENST00000517196 105 ntBASIC-0.97□□□□□ -2.56
RFT1Q96AA3 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 RNU6-141P-201ENST00000410499 105 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 RNU6-706P-201ENST00000517229 104 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 MIR5591-201ENST00000578248 65 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.98□□□□□ -2.57
RFT1Q96AA3 MIR545-201ENST00000385085 106 ntBASIC-0.99□□□□□ -2.57
RFT1Q96AA3 MIR548H1-201ENST00000408610 102 ntBASIC-0.99□□□□□ -2.57
RFT1Q96AA3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.99□□□□□ -2.57
RFT1Q96AA3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.99□□□□□ -2.57
RFT1Q96AA3 AC138207.3-201ENST00000585289 166 ntBASIC-0.99□□□□□ -2.57
RFT1Q96AA3 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 MIR548AM-201ENST00000584298 74 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 MIR4317-201ENST00000637586 65 ntBASIC-1.01□□□□□ -2.57
RFT1Q96AA3 MIR379-201ENST00000362218 67 ntBASIC-1.02□□□□□ -2.57
RFT1Q96AA3 HLA-S-202ENST00000425174 53 ntBASIC-1.02□□□□□ -2.57
RFT1Q96AA3 MIR3115-201ENST00000577915 68 ntBASIC-1.02□□□□□ -2.57
RFT1Q96AA3 MIR6738-201ENST00000619620 64 ntBASIC-1.02□□□□□ -2.57
RFT1Q96AA3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.03□□□□□ -2.57
RFT1Q96AA3 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.03□□□□□ -2.57
RFT1Q96AA3 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.03□□□□□ -2.57
RFT1Q96AA3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.03□□□□□ -2.57
RFT1Q96AA3 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.04□□□□□ -2.58
RFT1Q96AA3 MIR4770-201ENST00000579149 58 ntBASIC-1.04□□□□□ -2.58
RFT1Q96AA3 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.05□□□□□ -2.58
RFT1Q96AA3 RNU6-59P-201ENST00000384787 107 ntBASIC-1.05□□□□□ -2.58
RFT1Q96AA3 SNORD113-3-201ENST00000364830 72 ntBASIC-1.06□□□□□ -2.58
RFT1Q96AA3 snoU13.19-201ENST00000459148 104 ntBASIC-1.06□□□□□ -2.58
RFT1Q96AA3 MIR548AX-201ENST00000580117 73 ntBASIC-1.06□□□□□ -2.58
RFT1Q96AA3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.06□□□□□ -2.58
RFT1Q96AA3 RNU6-822P-201ENST00000362707 106 ntBASIC-1.07□□□□□ -2.58
RFT1Q96AA3 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.08□□□□□ -2.58
RFT1Q96AA3 MIR1254-1-201ENST00000408257 97 ntBASIC-1.08□□□□□ -2.58
RFT1Q96AA3 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.09□□□□□ -2.58
RFT1Q96AA3 AC108019.1-201ENST00000512540 175 ntBASIC-1.11□□□□□ -2.59
RFT1Q96AA3 RNA5SP476-201ENST00000516613 103 ntBASIC-1.11□□□□□ -2.59
RFT1Q96AA3 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.12□□□□□ -2.59
RFT1Q96AA3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.12□□□□□ -2.59
RFT1Q96AA3 FTX_4.1-201ENST00000616291 147 ntBASIC-1.12□□□□□ -2.59
RFT1Q96AA3 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.13□□□□□ -2.59
RFT1Q96AA3 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.13□□□□□ -2.59
RFT1Q96AA3 MIR4756-201ENST00000577874 78 ntBASIC-1.13□□□□□ -2.59
RFT1Q96AA3 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
RFT1Q96AA3 RNU6-30P-201ENST00000384561 107 ntBASIC-1.14□□□□□ -2.59
RFT1Q96AA3 SNORD115.2-201ENST00000391126 59 ntBASIC-1.14□□□□□ -2.59
RFT1Q96AA3 AC097484.2-201ENST00000509147 251 ntBASIC-1.15□□□□□ -2.59
RFT1Q96AA3 RNA5SP224-201ENST00000365069 126 ntBASIC-1.16□□□□□ -2.6
RFT1Q96AA3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.17□□□□□ -2.6
RFT1Q96AA3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.18□□□□□ -2.6
RFT1Q96AA3 HAR1A.1-201ENST00000459583 118 ntBASIC-1.19□□□□□ -2.6
RFT1Q96AA3 RNU6-345P-201ENST00000517001 107 ntBASIC-1.2□□□□□ -2.6
RFT1Q96AA3 RNU6-836P-201ENST00000362920 107 ntBASIC-1.21□□□□□ -2.6
RFT1Q96AA3 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.23□□□□□ -2.61
RFT1Q96AA3 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.23□□□□□ -2.61
RFT1Q96AA3 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.24□□□□□ -2.61
RFT1Q96AA3 SNORD45C-201ENST00000383893 79 ntBASIC-1.24□□□□□ -2.61
RFT1Q96AA3 MIR664B-201ENST00000626756 61 ntBASIC-1.24□□□□□ -2.61
RFT1Q96AA3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.27□□□□□ -2.61
RFT1Q96AA3 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.28□□□□□ -2.61
RFT1Q96AA3 MIR587-201ENST00000384845 96 ntBASIC-1.28□□□□□ -2.61
RFT1Q96AA3 MIR656-201ENST00000385224 78 ntBASIC-1.28□□□□□ -2.61
RFT1Q96AA3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.28□□□□□ -2.61
RFT1Q96AA3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.29□□□□□ -2.62
RFT1Q96AA3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
RFT1Q96AA3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.3□□□□□ -2.62
RFT1Q96AA3 RNU6-118P-201ENST00000516552 102 ntBASIC-1.3□□□□□ -2.62
RFT1Q96AA3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
RFT1Q96AA3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.32□□□□□ -2.62
RFT1Q96AA3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.32□□□□□ -2.62
RFT1Q96AA3 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.33□□□□□ -2.62
RFT1Q96AA3 MIR4748-201ENST00000578076 82 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms