Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU6-589P-201ENST00000516485 107 ntBASIC-3.63□□□□□ -2.99
H3F3AP84243 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.64□□□□□ -2.99
H3F3AP84243 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.64□□□□□ -2.99
H3F3AP84243 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.64□□□□□ -2.99
H3F3AP84243 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.64□□□□□ -2.99
H3F3AP84243 AL117351.2-201ENST00000513571 157 ntBASIC-3.65□□□□□ -2.99
H3F3AP84243 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.66□□□□□ -3
H3F3AP84243 RNY1P5-201ENST00000383890 115 ntBASIC-3.66□□□□□ -3
H3F3AP84243 RNU6-419P-201ENST00000517030 63 ntBASIC-3.66□□□□□ -3
H3F3AP84243 MIR4712-201ENST00000583750 82 ntBASIC-3.66□□□□□ -3
H3F3AP84243 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.67□□□□□ -3
H3F3AP84243 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.67□□□□□ -3
H3F3AP84243 AL359920.1-201ENST00000618332 176 ntBASIC-3.67□□□□□ -3
H3F3AP84243 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.68□□□□□ -3
H3F3AP84243 AC062037.1-201ENST00000605302 128 ntBASIC-3.68□□□□□ -3
H3F3AP84243 MIR5588-201ENST00000581890 63 ntBASIC-3.69□□□□□ -3
H3F3AP84243 IGLL4P-201ENST00000614590 133 ntBASIC-3.69□□□□□ -3
H3F3AP84243 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.7□□□□□ -3
H3F3AP84243 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.7□□□□□ -3
H3F3AP84243 AC139453.2-201ENST00000487255 133 ntBASIC-3.7□□□□□ -3
H3F3AP84243 RNU6-803P-201ENST00000516034 102 ntBASIC-3.7□□□□□ -3
H3F3AP84243 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.71□□□□□ -3
H3F3AP84243 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.71□□□□□ -3
H3F3AP84243 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.73□□□□□ -3.01
H3F3AP84243 MIR1245B-201ENST00000636115 69 ntBASIC-3.73□□□□□ -3.01
H3F3AP84243 RNU6-979P-201ENST00000383896 107 ntBASIC-3.75□□□□□ -3.01
H3F3AP84243 RNU6-663P-201ENST00000391105 106 ntBASIC-3.75□□□□□ -3.01
H3F3AP84243 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.76□□□□□ -3.01
H3F3AP84243 RNU6-463P-201ENST00000384340 107 ntBASIC-3.76□□□□□ -3.01
H3F3AP84243 MIR509-1-201ENST00000385265 94 ntBASIC-3.76□□□□□ -3.01
H3F3AP84243 MIR509-2-201ENST00000390724 91 ntBASIC-3.76□□□□□ -3.01
H3F3AP84243 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.76□□□□□ -3.01
H3F3AP84243 SNORD114-13-201ENST00000364377 74 ntBASIC-3.77□□□□□ -3.01
H3F3AP84243 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.77□□□□□ -3.01
H3F3AP84243 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.78□□□□□ -3.01
H3F3AP84243 RNU6-411P-201ENST00000384451 107 ntBASIC-3.78□□□□□ -3.01
H3F3AP84243 AL365222.1-201ENST00000614661 98 ntBASIC-3.78□□□□□ -3.01
H3F3AP84243 RNU6-640P-201ENST00000363693 105 ntBASIC-3.79□□□□□ -3.02
H3F3AP84243 AC008267.6-201ENST00000441664 139 ntBASIC-3.79□□□□□ -3.02
H3F3AP84243 RNY4-201ENST00000516507 96 ntBASIC-3.79□□□□□ -3.02
H3F3AP84243 SNORD115.2-201ENST00000391126 59 ntBASIC-3.8□□□□□ -3.02
H3F3AP84243 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.82□□□□□ -3.02
H3F3AP84243 MIR3938-201ENST00000582157 103 ntBASIC-3.82□□□□□ -3.02
H3F3AP84243 RNU6-940P-201ENST00000363433 104 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 SNORA25.4-201ENST00000363666 124 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 RNU6-959P-201ENST00000384671 107 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 MIR656-201ENST00000385224 78 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 RNU7-171P-201ENST00000459581 62 ntBASIC-3.83□□□□□ -3.02
H3F3AP84243 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.84□□□□□ -3.02
H3F3AP84243 RNU6-854P-201ENST00000364036 107 ntBASIC-3.85□□□□□ -3.03
H3F3AP84243 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.85□□□□□ -3.03
H3F3AP84243 MT-TG-201ENST00000387429 68 ntBASIC-3.85□□□□□ -3.03
H3F3AP84243 MIR4317-201ENST00000637586 65 ntBASIC-3.85□□□□□ -3.03
H3F3AP84243 SNORD45C-201ENST00000383893 79 ntBASIC-3.86□□□□□ -3.03
H3F3AP84243 RNU6-634P-201ENST00000459134 106 ntBASIC-3.86□□□□□ -3.03
H3F3AP84243 RNA5SP224-201ENST00000365069 126 ntBASIC-3.87□□□□□ -3.03
H3F3AP84243 SNORD115-45-201ENST00000391078 81 ntBASIC-3.88□□□□□ -3.03
H3F3AP84243 SNORD30.1-201ENST00000391309 70 ntBASIC-3.88□□□□□ -3.03
H3F3AP84243 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.9□□□□□ -3.03
H3F3AP84243 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.91□□□□□ -3.04
H3F3AP84243 RNY4P10-201ENST00000365571 96 ntBASIC-3.91□□□□□ -3.04
H3F3AP84243 RNU6-32P-201ENST00000383948 107 ntBASIC-3.92□□□□□ -3.04
H3F3AP84243 RNU6-13P-201ENST00000384248 107 ntBASIC-3.92□□□□□ -3.04
H3F3AP84243 RNU6-12P-201ENST00000384604 107 ntBASIC-3.92□□□□□ -3.04
H3F3AP84243 RNU6-41P-201ENST00000384741 107 ntBASIC-3.92□□□□□ -3.04
H3F3AP84243 RNU6-49P-201ENST00000384256 107 ntBASIC-3.93□□□□□ -3.04
H3F3AP84243 MIR548X-201ENST00000580069 75 ntBASIC-3.93□□□□□ -3.04
H3F3AP84243 MIR4511-201ENST00000582784 87 ntBASIC-3.93□□□□□ -3.04
H3F3AP84243 MIR3133-201ENST00000583157 78 ntBASIC-3.93□□□□□ -3.04
H3F3AP84243 RNU6-836P-201ENST00000362920 107 ntBASIC-3.94□□□□□ -3.04
H3F3AP84243 MIR124-1-201ENST00000385275 85 ntBASIC-3.94□□□□□ -3.04
H3F3AP84243 RNA5SP106-201ENST00000517274 100 ntBASIC-3.94□□□□□ -3.04
H3F3AP84243 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.95□□□□□ -3.04
H3F3AP84243 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.95□□□□□ -3.04
H3F3AP84243 U7.4-201ENST00000614961 63 ntBASIC-3.95□□□□□ -3.04
H3F3AP84243 RNU6-242P-201ENST00000384359 107 ntBASIC-3.99□□□□□ -3.05
H3F3AP84243 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.99□□□□□ -3.05
H3F3AP84243 AC103706.3-201ENST00000636297 85 ntBASIC-3.99□□□□□ -3.05
H3F3AP84243 MIR494-201ENST00000349529 81 ntBASIC-4□□□□□ -3.05
H3F3AP84243 RNU6-1276P-201ENST00000365372 104 ntBASIC-4□□□□□ -3.05
H3F3AP84243 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.01□□□□□ -3.05
H3F3AP84243 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.01□□□□□ -3.05
H3F3AP84243 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.01□□□□□ -3.05
H3F3AP84243 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.02□□□□□ -3.05
H3F3AP84243 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.02□□□□□ -3.05
H3F3AP84243 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.02□□□□□ -3.05
H3F3AP84243 MIR4666B-201ENST00000578142 81 ntBASIC-4.02□□□□□ -3.05
H3F3AP84243 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.03□□□□□ -3.05
H3F3AP84243 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.03□□□□□ -3.05
H3F3AP84243 RNU6-147P-201ENST00000383983 107 ntBASIC-4.04□□□□□ -3.06
H3F3AP84243 RNU6-987P-201ENST00000384759 104 ntBASIC-4.04□□□□□ -3.06
H3F3AP84243 U6.111-201ENST00000636093 83 ntBASIC-4.04□□□□□ -3.06
H3F3AP84243 RNU6-209P-201ENST00000384118 107 ntBASIC-4.05□□□□□ -3.06
H3F3AP84243 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.05□□□□□ -3.06
H3F3AP84243 MIR548AH-201ENST00000637109 76 ntBASIC-4.05□□□□□ -3.06
H3F3AP84243 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.06□□□□□ -3.06
H3F3AP84243 RNU6-776P-201ENST00000364403 104 ntBASIC-4.06□□□□□ -3.06
H3F3AP84243 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.06□□□□□ -3.06
H3F3AP84243 RNU6-787P-201ENST00000384032 107 ntBASIC-4.06□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms