Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 RNU6-284P-201ENST00000411105 106 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 AC120024.2-201ENST00000576526 175 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 MIR4436A-201ENST00000585278 85 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 MIR198-201ENST00000637333 62 ntBASIC-0.29□□□□□ -2.46
RXRBP28702 MIR1207-201ENST00000408249 87 ntBASIC-0.3□□□□□ -2.46
RXRBP28702 SCARNA17-201ENST00000516183 144 ntBASIC-0.3□□□□□ -2.46
RXRBP28702 RNU6-68P-201ENST00000516576 104 ntBASIC-0.3□□□□□ -2.46
RXRBP28702 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.31□□□□□ -2.46
RXRBP28702 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.31□□□□□ -2.46
RXRBP28702 MIR378F-201ENST00000578143 78 ntBASIC-0.32□□□□□ -2.46
RXRBP28702 SNORD114-14-201ENST00000362723 75 ntBASIC-0.33□□□□□ -2.46
RXRBP28702 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.33□□□□□ -2.46
RXRBP28702 SNORD64-201ENST00000386683 67 ntBASIC-0.33□□□□□ -2.46
RXRBP28702 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
RXRBP28702 SNORA3B-201ENST00000391305 131 ntBASIC-0.33□□□□□ -2.46
RXRBP28702 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.33□□□□□ -2.46
RXRBP28702 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.34□□□□□ -2.46
RXRBP28702 SNORD114-3-201ENST00000364969 75 ntBASIC-0.34□□□□□ -2.46
RXRBP28702 MIR3115-201ENST00000577915 68 ntBASIC-0.34□□□□□ -2.46
RXRBP28702 MIR6818-201ENST00000621576 65 ntBASIC-0.36□□□□□ -2.47
RXRBP28702 U6.97-201ENST00000636904 101 ntBASIC-0.36□□□□□ -2.47
RXRBP28702 MIR365A-201ENST00000362260 87 ntBASIC-0.37□□□□□ -2.47
RXRBP28702 RNY4P27-201ENST00000363341 96 ntBASIC-0.37□□□□□ -2.47
RXRBP28702 MIR1285-2-201ENST00000408311 88 ntBASIC-0.39□□□□□ -2.47
RXRBP28702 RNA5SP180-201ENST00000516181 101 ntBASIC-0.39□□□□□ -2.47
RXRBP28702 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.39□□□□□ -2.47
RXRBP28702 MIR196A1-201ENST00000388006 70 ntBASIC-0.4□□□□□ -2.47
RXRBP28702 MIR4441-201ENST00000582623 100 ntBASIC-0.4□□□□□ -2.47
RXRBP28702 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.41□□□□□ -2.48
RXRBP28702 MIR382-201ENST00000637119 76 ntBASIC-0.41□□□□□ -2.48
RXRBP28702 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.41□□□□□ -2.48
RXRBP28702 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.43□□□□□ -2.48
RXRBP28702 AC138207.3-201ENST00000585289 166 ntBASIC-0.43□□□□□ -2.48
RXRBP28702 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.45□□□□□ -2.48
RXRBP28702 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.45□□□□□ -2.48
RXRBP28702 RNU7-134P-201ENST00000458997 64 ntBASIC-0.45□□□□□ -2.48
RXRBP28702 RNU6-79P-201ENST00000362511 107 ntBASIC-0.46□□□□□ -2.48
RXRBP28702 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.46□□□□□ -2.48
RXRBP28702 SNORD18C-201ENST00000362704 69 ntBASIC-0.47□□□□□ -2.48
RXRBP28702 SNORD114-25-201ENST00000363742 72 ntBASIC-0.47□□□□□ -2.48
RXRBP28702 RNU6-695P-201ENST00000391157 104 ntBASIC-0.47□□□□□ -2.48
RXRBP28702 AC018880.2-201ENST00000414265 201 ntBASIC-0.47□□□□□ -2.48
RXRBP28702 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.47□□□□□ -2.48
RXRBP28702 RNU6-164P-201ENST00000364604 103 ntBASIC-0.48□□□□□ -2.49
RXRBP28702 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.48□□□□□ -2.49
RXRBP28702 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.48□□□□□ -2.49
RXRBP28702 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.49□□□□□ -2.49
RXRBP28702 SNORD83B-201ENST00000386745 93 ntBASIC-0.49□□□□□ -2.49
RXRBP28702 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.49□□□□□ -2.49
RXRBP28702 AL500527.2-201ENST00000454105 95 ntBASIC-0.49□□□□□ -2.49
RXRBP28702 MIR3165-201ENST00000579874 75 ntBASIC-0.49□□□□□ -2.49
RXRBP28702 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.5□□□□□ -2.49
RXRBP28702 MIR1246-201ENST00000636535 73 ntBASIC-0.5□□□□□ -2.49
RXRBP28702 MIR379-201ENST00000362218 67 ntBASIC-0.52□□□□□ -2.49
RXRBP28702 RNU6-226P-201ENST00000363778 107 ntBASIC-0.52□□□□□ -2.49
RXRBP28702 SNORD111B-201ENST00000408587 80 ntBASIC-0.52□□□□□ -2.49
RXRBP28702 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.53□□□□□ -2.49
RXRBP28702 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.54□□□□□ -2.5
RXRBP28702 MIR496-201ENST00000385226 102 ntBASIC-0.54□□□□□ -2.5
RXRBP28702 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.55□□□□□ -2.5
RXRBP28702 snoU83B.1-201ENST00000517136 88 ntBASIC-0.55□□□□□ -2.5
RXRBP28702 MIR4499-201ENST00000584834 69 ntBASIC-0.55□□□□□ -2.5
RXRBP28702 uc_338.19-201ENST00000616808 99 ntBASIC-0.55□□□□□ -2.5
RXRBP28702 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.56□□□□□ -2.5
RXRBP28702 RNY4P7-201ENST00000364600 96 ntBASIC-0.57□□□□□ -2.5
RXRBP28702 MIR4306-201ENST00000583390 91 ntBASIC-0.57□□□□□ -2.5
RXRBP28702 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.58□□□□□ -2.5
RXRBP28702 RNU6-485P-201ENST00000363475 107 ntBASIC-0.6□□□□□ -2.51
RXRBP28702 RNU6-912P-201ENST00000363800 104 ntBASIC-0.6□□□□□ -2.51
RXRBP28702 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.61□□□□□ -2.51
RXRBP28702 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.61□□□□□ -2.51
RXRBP28702 AC091912.2-201ENST00000624798 167 ntBASIC-0.61□□□□□ -2.51
RXRBP28702 MIR6874-201ENST00000635894 71 ntBASIC-0.61□□□□□ -2.51
RXRBP28702 RNA5SP93-201ENST00000362525 114 ntBASIC-0.62□□□□□ -2.51
RXRBP28702 SNORD115.2-201ENST00000391126 59 ntBASIC-0.62□□□□□ -2.51
RXRBP28702 RNU6-706P-201ENST00000517229 104 ntBASIC-0.63□□□□□ -2.51
RXRBP28702 RNA5SP224-201ENST00000365069 126 ntBASIC-0.64□□□□□ -2.51
RXRBP28702 RNU6-119P-201ENST00000364882 107 ntBASIC-0.65□□□□□ -2.51
RXRBP28702 RNY4-201ENST00000516507 96 ntBASIC-0.65□□□□□ -2.51
RXRBP28702 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.66□□□□□ -2.52
RXRBP28702 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.66□□□□□ -2.52
RXRBP28702 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.66□□□□□ -2.52
RXRBP28702 HLA-S-202ENST00000425174 53 ntBASIC-0.66□□□□□ -2.52
RXRBP28702 RNU6-576P-201ENST00000390854 102 ntBASIC-0.67□□□□□ -2.52
RXRBP28702 RNU6-836P-201ENST00000362920 107 ntBASIC-0.68□□□□□ -2.52
RXRBP28702 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.68□□□□□ -2.52
RXRBP28702 RNU6-983P-201ENST00000516004 103 ntBASIC-0.69□□□□□ -2.52
RXRBP28702 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.69□□□□□ -2.52
RXRBP28702 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.7□□□□□ -2.52
RXRBP28702 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.7□□□□□ -2.52
RXRBP28702 MIR8485-201ENST00000401372 91 ntBASIC-0.7□□□□□ -2.52
RXRBP28702 FTX_4.1-201ENST00000616291 147 ntBASIC-0.7□□□□□ -2.52
RXRBP28702 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.71□□□□□ -2.52
RXRBP28702 RNU6-118P-201ENST00000516552 102 ntBASIC-0.71□□□□□ -2.52
RXRBP28702 RNU6-400P-201ENST00000391173 106 ntBASIC-0.72□□□□□ -2.52
RXRBP28702 MIR5591-201ENST00000578248 65 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms