Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR1207-201ENST00000408249 87 ntBASIC-0.63□□□□□ -2.51
LIG1P18858 RNA5SP180-201ENST00000516181 101 ntBASIC-0.63□□□□□ -2.51
LIG1P18858 MIR378F-201ENST00000578143 78 ntBASIC-0.64□□□□□ -2.51
LIG1P18858 MIR6818-201ENST00000621576 65 ntBASIC-0.64□□□□□ -2.51
LIG1P18858 MIR548N-201ENST00000408742 75 ntBASIC-0.65□□□□□ -2.51
LIG1P18858 MIR382-201ENST00000637119 76 ntBASIC-0.65□□□□□ -2.51
LIG1P18858 MIR4317-201ENST00000637586 65 ntBASIC-0.65□□□□□ -2.51
LIG1P18858 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.66□□□□□ -2.52
LIG1P18858 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.67□□□□□ -2.52
LIG1P18858 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
LIG1P18858 AC120024.2-201ENST00000576526 175 ntBASIC-0.67□□□□□ -2.52
LIG1P18858 RNU6-822P-201ENST00000362707 106 ntBASIC-0.68□□□□□ -2.52
LIG1P18858 RNY4P27-201ENST00000363341 96 ntBASIC-0.68□□□□□ -2.52
LIG1P18858 SNORD114-3-201ENST00000364969 75 ntBASIC-0.68□□□□□ -2.52
LIG1P18858 AC013734.1-201ENST00000619329 111 ntBASIC-0.68□□□□□ -2.52
LIG1P18858 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.69□□□□□ -2.52
LIG1P18858 snoU83B.1-201ENST00000517136 88 ntBASIC-0.69□□□□□ -2.52
LIG1P18858 MIR365A-201ENST00000362260 87 ntBASIC-0.7□□□□□ -2.52
LIG1P18858 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.7□□□□□ -2.52
LIG1P18858 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.7□□□□□ -2.52
LIG1P18858 SNORD114-25-201ENST00000363742 72 ntBASIC-0.71□□□□□ -2.52
LIG1P18858 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.72□□□□□ -2.52
LIG1P18858 RNU6-164P-201ENST00000364604 103 ntBASIC-0.73□□□□□ -2.53
LIG1P18858 AC018880.2-201ENST00000414265 201 ntBASIC-0.73□□□□□ -2.53
LIG1P18858 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.73□□□□□ -2.53
LIG1P18858 MIR4441-201ENST00000582623 100 ntBASIC-0.73□□□□□ -2.53
LIG1P18858 RNU6-563P-201ENST00000364872 108 ntBASIC-0.74□□□□□ -2.53
LIG1P18858 MIR1285-2-201ENST00000408311 88 ntBASIC-0.74□□□□□ -2.53
LIG1P18858 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.76□□□□□ -2.53
LIG1P18858 RNU6-59P-201ENST00000384787 107 ntBASIC-0.76□□□□□ -2.53
LIG1P18858 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.76□□□□□ -2.53
LIG1P18858 MIR581-201ENST00000384895 96 ntBASIC-0.78□□□□□ -2.53
LIG1P18858 RNU6-79P-201ENST00000362511 107 ntBASIC-0.79□□□□□ -2.54
LIG1P18858 AL500527.2-201ENST00000454105 95 ntBASIC-0.79□□□□□ -2.54
LIG1P18858 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.8□□□□□ -2.54
LIG1P18858 U6.97-201ENST00000636904 101 ntBASIC-0.8□□□□□ -2.54
LIG1P18858 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.81□□□□□ -2.54
LIG1P18858 SNORD83B-201ENST00000386745 93 ntBASIC-0.81□□□□□ -2.54
LIG1P18858 SNORD18C-201ENST00000362704 69 ntBASIC-0.82□□□□□ -2.54
LIG1P18858 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.82□□□□□ -2.54
LIG1P18858 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.83□□□□□ -2.54
LIG1P18858 MIR3165-201ENST00000579874 75 ntBASIC-0.84□□□□□ -2.54
LIG1P18858 RNU6-576P-201ENST00000390854 102 ntBASIC-0.85□□□□□ -2.55
LIG1P18858 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.85□□□□□ -2.55
LIG1P18858 MIR1246-201ENST00000636535 73 ntBASIC-0.85□□□□□ -2.55
LIG1P18858 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.87□□□□□ -2.55
LIG1P18858 RNU7-134P-201ENST00000458997 64 ntBASIC-0.87□□□□□ -2.55
LIG1P18858 RNU6-68P-201ENST00000516576 104 ntBASIC-0.88□□□□□ -2.55
LIG1P18858 MIR4306-201ENST00000583390 91 ntBASIC-0.88□□□□□ -2.55
LIG1P18858 MIR379-201ENST00000362218 67 ntBASIC-0.89□□□□□ -2.55
LIG1P18858 MIR4499-201ENST00000584834 69 ntBASIC-0.89□□□□□ -2.55
LIG1P18858 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.89□□□□□ -2.55
LIG1P18858 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.9□□□□□ -2.55
LIG1P18858 RNU6-226P-201ENST00000363778 107 ntBASIC-0.91□□□□□ -2.56
LIG1P18858 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.93□□□□□ -2.56
LIG1P18858 AC091912.2-201ENST00000624798 167 ntBASIC-0.93□□□□□ -2.56
LIG1P18858 uc_338.19-201ENST00000616808 99 ntBASIC-0.94□□□□□ -2.56
LIG1P18858 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.95□□□□□ -2.56
LIG1P18858 RNU6-695P-201ENST00000391157 104 ntBASIC-0.95□□□□□ -2.56
LIG1P18858 MIR496-201ENST00000385226 102 ntBASIC-0.96□□□□□ -2.56
LIG1P18858 RNU6-400P-201ENST00000391173 106 ntBASIC-0.97□□□□□ -2.56
LIG1P18858 MIR6874-201ENST00000635894 71 ntBASIC-0.97□□□□□ -2.56
LIG1P18858 U6.103-201ENST00000637085 61 ntBASIC-0.97□□□□□ -2.56
LIG1P18858 Y_RNA.320-201ENST00000365144 102 ntBASIC-1□□□□□ -2.57
LIG1P18858 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.01□□□□□ -2.57
LIG1P18858 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.01□□□□□ -2.57
LIG1P18858 RNY4P7-201ENST00000364600 96 ntBASIC-1.02□□□□□ -2.57
LIG1P18858 RNU6-706P-201ENST00000517229 104 ntBASIC-1.02□□□□□ -2.57
LIG1P18858 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.03□□□□□ -2.57
LIG1P18858 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.03□□□□□ -2.57
LIG1P18858 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.05□□□□□ -2.58
LIG1P18858 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.05□□□□□ -2.58
LIG1P18858 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.06□□□□□ -2.58
LIG1P18858 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.06□□□□□ -2.58
LIG1P18858 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.06□□□□□ -2.58
LIG1P18858 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.08□□□□□ -2.58
LIG1P18858 RNU6-724P-201ENST00000390958 105 ntBASIC-1.08□□□□□ -2.58
LIG1P18858 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.09□□□□□ -2.58
LIG1P18858 HLA-S-202ENST00000425174 53 ntBASIC-1.09□□□□□ -2.58
LIG1P18858 RNU6-912P-201ENST00000363800 104 ntBASIC-1.11□□□□□ -2.59
LIG1P18858 RNA5SP93-201ENST00000362525 114 ntBASIC-1.12□□□□□ -2.59
LIG1P18858 RNU6-119P-201ENST00000364882 107 ntBASIC-1.12□□□□□ -2.59
LIG1P18858 MIR8485-201ENST00000401372 91 ntBASIC-1.12□□□□□ -2.59
LIG1P18858 RNU6-983P-201ENST00000516004 103 ntBASIC-1.13□□□□□ -2.59
LIG1P18858 AC138207.3-201ENST00000585289 166 ntBASIC-1.13□□□□□ -2.59
LIG1P18858 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.15□□□□□ -2.59
LIG1P18858 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
LIG1P18858 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.17□□□□□ -2.6
LIG1P18858 RNY4-201ENST00000516507 96 ntBASIC-1.17□□□□□ -2.6
LIG1P18858 MIR6502-201ENST00000617296 76 ntBASIC-1.18□□□□□ -2.6
LIG1P18858 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.19□□□□□ -2.6
LIG1P18858 SNORD115.2-201ENST00000391126 59 ntBASIC-1.19□□□□□ -2.6
LIG1P18858 MIR3123-201ENST00000583417 75 ntBASIC-1.19□□□□□ -2.6
LIG1P18858 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.21□□□□□ -2.6
LIG1P18858 RNU6-118P-201ENST00000516552 102 ntBASIC-1.21□□□□□ -2.6
LIG1P18858 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.6
LIG1P18858 RNU6-836P-201ENST00000362920 107 ntBASIC-1.23□□□□□ -2.61
LIG1P18858 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.23□□□□□ -2.61
LIG1P18858 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.23□□□□□ -2.61
LIG1P18858 RNA5SP224-201ENST00000365069 126 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms