Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MIR196A2-201ENST00000385189 110 ntBASIC-0.13□□□□□ -2.43
HOXD8P13378 RNU6-563P-201ENST00000364872 108 ntBASIC-0.14□□□□□ -2.43
HOXD8P13378 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.14□□□□□ -2.43
HOXD8P13378 SNORA3B-201ENST00000391305 131 ntBASIC-0.14□□□□□ -2.43
HOXD8P13378 U4.2-201ENST00000618561 85 ntBASIC-0.14□□□□□ -2.43
HOXD8P13378 SNORD64-201ENST00000386683 67 ntBASIC-0.15□□□□□ -2.43
HOXD8P13378 RNU7-134P-201ENST00000458997 64 ntBASIC-0.15□□□□□ -2.43
HOXD8P13378 RNU6-68P-201ENST00000516576 104 ntBASIC-0.15□□□□□ -2.43
HOXD8P13378 MIR548AX-201ENST00000580117 73 ntBASIC-0.15□□□□□ -2.43
HOXD8P13378 MIR548AZ-201ENST00000616567 95 ntBASIC-0.15□□□□□ -2.43
HOXD8P13378 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.16□□□□□ -2.44
HOXD8P13378 U6.97-201ENST00000636904 101 ntBASIC-0.16□□□□□ -2.44
HOXD8P13378 RNU6-836P-201ENST00000362920 107 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 SNORD114-25-201ENST00000363742 72 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 RNA5SP275-201ENST00000363936 118 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 SNORD115.2-201ENST00000391126 59 ntBASIC-0.17□□□□□ -2.44
HOXD8P13378 RNU6-164P-201ENST00000364604 103 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 RNU6-284P-201ENST00000411105 106 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 SNORD126-201ENST00000459475 77 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 RNU6-320P-201ENST00000516511 106 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 MIR4324-201ENST00000584846 72 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 MIR6818-201ENST00000621576 65 ntBASIC-0.18□□□□□ -2.44
HOXD8P13378 RNU6-79P-201ENST00000362511 107 ntBASIC-0.19□□□□□ -2.44
HOXD8P13378 AL500527.2-201ENST00000454105 95 ntBASIC-0.19□□□□□ -2.44
HOXD8P13378 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.19□□□□□ -2.44
HOXD8P13378 RNU6-10P-201ENST00000384036 107 ntBASIC-0.2□□□□□ -2.44
HOXD8P13378 MIR601-201ENST00000385256 79 ntBASIC-0.2□□□□□ -2.44
HOXD8P13378 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.2□□□□□ -2.44
HOXD8P13378 MIR378F-201ENST00000578143 78 ntBASIC-0.2□□□□□ -2.44
HOXD8P13378 MIR382-201ENST00000637119 76 ntBASIC-0.2□□□□□ -2.44
HOXD8P13378 RNU6-695P-201ENST00000391157 104 ntBASIC-0.21□□□□□ -2.44
HOXD8P13378 snoU83B.1-201ENST00000517136 88 ntBASIC-0.21□□□□□ -2.44
HOXD8P13378 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.22□□□□□ -2.44
HOXD8P13378 MIR6738-201ENST00000619620 64 ntBASIC-0.22□□□□□ -2.44
HOXD8P13378 MIR4320-201ENST00000636981 65 ntBASIC-0.23□□□□□ -2.45
HOXD8P13378 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.24□□□□□ -2.45
HOXD8P13378 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 SNORA32.3-201ENST00000384772 121 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 MIR587-201ENST00000384845 96 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 MIR1207-201ENST00000408249 87 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 MIR6874-201ENST00000635894 71 ntBASIC-0.25□□□□□ -2.45
HOXD8P13378 RNA5SP224-201ENST00000365069 126 ntBASIC-0.26□□□□□ -2.45
HOXD8P13378 RNU6-576P-201ENST00000390854 102 ntBASIC-0.27□□□□□ -2.45
HOXD8P13378 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.27□□□□□ -2.45
HOXD8P13378 AC091912.2-201ENST00000624798 167 ntBASIC-0.27□□□□□ -2.45
HOXD8P13378 RNU6-400P-201ENST00000391173 106 ntBASIC-0.28□□□□□ -2.45
HOXD8P13378 MIR8485-201ENST00000401372 91 ntBASIC-0.28□□□□□ -2.45
HOXD8P13378 MIR3115-201ENST00000577915 68 ntBASIC-0.28□□□□□ -2.45
HOXD8P13378 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 MIR196A1-201ENST00000388006 70 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.29□□□□□ -2.46
HOXD8P13378 RNU6-226P-201ENST00000363778 107 ntBASIC-0.3□□□□□ -2.46
HOXD8P13378 SNORD114-3-201ENST00000364969 75 ntBASIC-0.3□□□□□ -2.46
HOXD8P13378 MT-TQ-201ENST00000387372 72 ntBASIC-0.3□□□□□ -2.46
HOXD8P13378 MIR1285-2-201ENST00000408311 88 ntBASIC-0.3□□□□□ -2.46
HOXD8P13378 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.3□□□□□ -2.46
HOXD8P13378 MIR4499-201ENST00000584834 69 ntBASIC-0.31□□□□□ -2.46
HOXD8P13378 FTX_4.1-201ENST00000616291 147 ntBASIC-0.31□□□□□ -2.46
HOXD8P13378 MIR365A-201ENST00000362260 87 ntBASIC-0.32□□□□□ -2.46
HOXD8P13378 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.32□□□□□ -2.46
HOXD8P13378 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.32□□□□□ -2.46
HOXD8P13378 SCARNA17-201ENST00000516183 144 ntBASIC-0.32□□□□□ -2.46
HOXD8P13378 RNU6-345P-201ENST00000517001 107 ntBASIC-0.32□□□□□ -2.46
HOXD8P13378 RNU6-912P-201ENST00000363800 104 ntBASIC-0.33□□□□□ -2.46
HOXD8P13378 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.33□□□□□ -2.46
HOXD8P13378 uc_338.19-201ENST00000616808 99 ntBASIC-0.33□□□□□ -2.46
HOXD8P13378 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.34□□□□□ -2.46
HOXD8P13378 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.34□□□□□ -2.46
HOXD8P13378 RNY4P27-201ENST00000363341 96 ntBASIC-0.35□□□□□ -2.47
HOXD8P13378 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.35□□□□□ -2.47
HOXD8P13378 SNORD45C-201ENST00000383893 79 ntBASIC-0.35□□□□□ -2.47
HOXD8P13378 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.36□□□□□ -2.47
HOXD8P13378 MIR4441-201ENST00000582623 100 ntBASIC-0.36□□□□□ -2.47
HOXD8P13378 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.36□□□□□ -2.47
HOXD8P13378 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.37□□□□□ -2.47
HOXD8P13378 MIR656-201ENST00000385224 78 ntBASIC-0.37□□□□□ -2.47
HOXD8P13378 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.38□□□□□ -2.47
HOXD8P13378 MIR1246-201ENST00000636535 73 ntBASIC-0.38□□□□□ -2.47
HOXD8P13378 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.39□□□□□ -2.47
HOXD8P13378 SNORD83B-201ENST00000386745 93 ntBASIC-0.39□□□□□ -2.47
HOXD8P13378 RNA5SP180-201ENST00000516181 101 ntBASIC-0.39□□□□□ -2.47
HOXD8P13378 MIR198-201ENST00000637333 62 ntBASIC-0.39□□□□□ -2.47
HOXD8P13378 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.4□□□□□ -2.47
HOXD8P13378 MIR1254-1-201ENST00000408257 97 ntBASIC-0.4□□□□□ -2.47
HOXD8P13378 snoU13.10-201ENST00000459301 103 ntBASIC-0.4□□□□□ -2.47
HOXD8P13378 MIR548W-201ENST00000581970 74 ntBASIC-0.4□□□□□ -2.47
HOXD8P13378 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.41□□□□□ -2.48
HOXD8P13378 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.41□□□□□ -2.48
HOXD8P13378 MIR496-201ENST00000385226 102 ntBASIC-0.41□□□□□ -2.48
HOXD8P13378 MIR548H1-201ENST00000408610 102 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms