Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 MIR4788-201ENST00000639104 80 ntBASIC0.05□□□□□ -2.4
KRT1P04264 RNU6-485P-201ENST00000363475 107 ntBASIC0.04□□□□□ -2.4
KRT1P04264 AC090616.4-201ENST00000448026 115 ntBASIC0.04□□□□□ -2.4
KRT1P04264 Y_RNA.382-201ENST00000365672 114 ntBASIC0.03□□□□□ -2.4
KRT1P04264 RNU6-10P-201ENST00000384036 107 ntBASIC0.03□□□□□ -2.4
KRT1P04264 SNORD4A-201ENST00000459174 72 ntBASIC0.03□□□□□ -2.4
KRT1P04264 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
KRT1P04264 Y_RNA.223-201ENST00000364290 113 ntBASIC0.02□□□□□ -2.41
KRT1P04264 RNA5SP300-201ENST00000391197 107 ntBASIC0.02□□□□□ -2.41
KRT1P04264 MIR1285-2-201ENST00000408311 88 ntBASIC0.02□□□□□ -2.41
KRT1P04264 AC021146.6-201ENST00000514659 117 ntBASIC0.02□□□□□ -2.41
KRT1P04264 AC120024.2-201ENST00000576526 175 ntBASIC0.02□□□□□ -2.41
KRT1P04264 MIR379-201ENST00000362218 67 ntBASIC0.01□□□□□ -2.41
KRT1P04264 MT-TQ-201ENST00000387372 72 ntBASIC0.01□□□□□ -2.41
KRT1P04264 Y_RNA.616-201ENST00000410835 95 ntBASIC0.01□□□□□ -2.41
KRT1P04264 Y_RNA.781-201ENST00000620301 103 ntBASIC0.01□□□□□ -2.41
KRT1P04264 MIR581-201ENST00000384895 96 ntBASIC0□□□□□ -2.41
KRT1P04264 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0□□□□□ -2.41
KRT1P04264 SNORD115.2-201ENST00000391126 59 ntBASIC0□□□□□ -2.41
KRT1P04264 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0□□□□□ -2.41
KRT1P04264 MIR6738-201ENST00000619620 64 ntBASIC0□□□□□ -2.41
KRT1P04264 U6.97-201ENST00000636904 101 ntBASIC0□□□□□ -2.41
KRT1P04264 SNORD114-11-201ENST00000363738 75 ntBASIC-0.01□□□□□ -2.41
KRT1P04264 MIR496-201ENST00000385226 102 ntBASIC-0.01□□□□□ -2.41
KRT1P04264 MIR4324-201ENST00000584846 72 ntBASIC-0.01□□□□□ -2.41
KRT1P04264 RNA5SP26-201ENST00000362406 119 ntBASIC-0.02□□□□□ -2.41
KRT1P04264 SNORD18C-201ENST00000362704 69 ntBASIC-0.02□□□□□ -2.41
KRT1P04264 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.02□□□□□ -2.41
KRT1P04264 SNORA32.3-201ENST00000384772 121 ntBASIC-0.02□□□□□ -2.41
KRT1P04264 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.03□□□□□ -2.41
KRT1P04264 RNU6-563P-201ENST00000364872 108 ntBASIC-0.04□□□□□ -2.42
KRT1P04264 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.04□□□□□ -2.42
KRT1P04264 RNA5SP93-201ENST00000362525 114 ntBASIC-0.05□□□□□ -2.42
KRT1P04264 SCARNA17-201ENST00000516183 144 ntBASIC-0.05□□□□□ -2.42
KRT1P04264 RNU6-68P-201ENST00000516576 104 ntBASIC-0.05□□□□□ -2.42
KRT1P04264 MIR3115-201ENST00000577915 68 ntBASIC-0.05□□□□□ -2.42
KRT1P04264 RNA5SP275-201ENST00000363936 118 ntBASIC-0.06□□□□□ -2.42
KRT1P04264 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.06□□□□□ -2.42
KRT1P04264 AC018880.2-201ENST00000414265 201 ntBASIC-0.07□□□□□ -2.42
KRT1P04264 MIR548AZ-201ENST00000616567 95 ntBASIC-0.07□□□□□ -2.42
KRT1P04264 RNU6-119P-201ENST00000364882 107 ntBASIC-0.08□□□□□ -2.42
KRT1P04264 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.09□□□□□ -2.42
KRT1P04264 RNU6-695P-201ENST00000391157 104 ntBASIC-0.09□□□□□ -2.42
KRT1P04264 RNU6-320P-201ENST00000516511 106 ntBASIC-0.09□□□□□ -2.42
KRT1P04264 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.09□□□□□ -2.42
KRT1P04264 RNU6-836P-201ENST00000362920 107 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 MIR147A-201ENST00000385079 72 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 MIR196A2-201ENST00000385189 110 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 SNORD126-201ENST00000459475 77 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.1□□□□□ -2.43
KRT1P04264 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.11□□□□□ -2.43
KRT1P04264 SNORD14C-201ENST00000365382 88 ntBASIC-0.11□□□□□ -2.43
KRT1P04264 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.11□□□□□ -2.43
KRT1P04264 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.12□□□□□ -2.43
KRT1P04264 RNU6-284P-201ENST00000411105 106 ntBASIC-0.12□□□□□ -2.43
KRT1P04264 MIR4436A-201ENST00000585278 85 ntBASIC-0.12□□□□□ -2.43
KRT1P04264 AC091912.2-201ENST00000624798 167 ntBASIC-0.12□□□□□ -2.43
KRT1P04264 MIR1246-201ENST00000636535 73 ntBASIC-0.13□□□□□ -2.43
KRT1P04264 MIR6818-201ENST00000621576 65 ntBASIC-0.14□□□□□ -2.43
KRT1P04264 SNORD114-14-201ENST00000362723 75 ntBASIC-0.15□□□□□ -2.43
KRT1P04264 RNU6-431P-201ENST00000383874 107 ntBASIC-0.15□□□□□ -2.43
KRT1P04264 SNORA3B-201ENST00000391305 131 ntBASIC-0.15□□□□□ -2.43
KRT1P04264 SNORD54-201ENST00000459159 67 ntBASIC-0.15□□□□□ -2.43
KRT1P04264 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.16□□□□□ -2.44
KRT1P04264 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.16□□□□□ -2.44
KRT1P04264 RNU6-79P-201ENST00000362511 107 ntBASIC-0.17□□□□□ -2.44
KRT1P04264 RNU6-164P-201ENST00000364604 103 ntBASIC-0.17□□□□□ -2.44
KRT1P04264 RNA5SP224-201ENST00000365069 126 ntBASIC-0.17□□□□□ -2.44
KRT1P04264 SNORD64-201ENST00000386683 67 ntBASIC-0.17□□□□□ -2.44
KRT1P04264 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
KRT1P04264 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.18□□□□□ -2.44
KRT1P04264 RNU6-912P-201ENST00000363800 104 ntBASIC-0.19□□□□□ -2.44
KRT1P04264 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.19□□□□□ -2.44
KRT1P04264 AL500527.2-201ENST00000454105 95 ntBASIC-0.19□□□□□ -2.44
KRT1P04264 snoU83B.1-201ENST00000517136 88 ntBASIC-0.19□□□□□ -2.44
KRT1P04264 MIR3165-201ENST00000579874 75 ntBASIC-0.19□□□□□ -2.44
KRT1P04264 SNORD114-25-201ENST00000363742 72 ntBASIC-0.2□□□□□ -2.44
KRT1P04264 MIR196A1-201ENST00000388006 70 ntBASIC-0.2□□□□□ -2.44
KRT1P04264 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.2□□□□□ -2.44
KRT1P04264 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.21□□□□□ -2.44
KRT1P04264 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.21□□□□□ -2.44
KRT1P04264 MIR4499-201ENST00000584834 69 ntBASIC-0.21□□□□□ -2.44
KRT1P04264 FTX_4.1-201ENST00000616291 147 ntBASIC-0.21□□□□□ -2.44
KRT1P04264 RNU6-1091P-201ENST00000363945 107 ntBASIC-0.22□□□□□ -2.44
KRT1P04264 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.22□□□□□ -2.44
KRT1P04264 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.22□□□□□ -2.44
KRT1P04264 SNORD83B-201ENST00000386745 93 ntBASIC-0.22□□□□□ -2.44
KRT1P04264 uc_338.19-201ENST00000616808 99 ntBASIC-0.23□□□□□ -2.45
KRT1P04264 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.23□□□□□ -2.45
KRT1P04264 MIR382-201ENST00000637119 76 ntBASIC-0.23□□□□□ -2.45
KRT1P04264 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.24□□□□□ -2.45
KRT1P04264 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.25□□□□□ -2.45
KRT1P04264 SNORD45C-201ENST00000383893 79 ntBASIC-0.25□□□□□ -2.45
KRT1P04264 RNU7-134P-201ENST00000458997 64 ntBASIC-0.25□□□□□ -2.45
KRT1P04264 RNU6-226P-201ENST00000363778 107 ntBASIC-0.26□□□□□ -2.45
KRT1P04264 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.26□□□□□ -2.45
KRT1P04264 MIR4306-201ENST00000583390 91 ntBASIC-0.26□□□□□ -2.45
KRT1P04264 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.27□□□□□ -2.45
KRT1P04264 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms