Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MIR507-201ENST00000385234 94 ntBASIC0.6□□□□□ -2.31
COL17A1Q9UMD9 RNU6-180P-201ENST00000516697 61 ntBASIC0.6□□□□□ -2.31
COL17A1Q9UMD9 RNU6-1169P-201ENST00000363537 103 ntBASIC0.59□□□□□ -2.32
COL17A1Q9UMD9 MIR548H2-201ENST00000408874 88 ntBASIC0.59□□□□□ -2.32
COL17A1Q9UMD9 RNU6-758P-201ENST00000516292 89 ntBASIC0.59□□□□□ -2.32
COL17A1Q9UMD9 MIR5190-201ENST00000581537 80 ntBASIC0.59□□□□□ -2.32
COL17A1Q9UMD9 RNA5SP368-201ENST00000364298 116 ntBASIC0.58□□□□□ -2.32
COL17A1Q9UMD9 MIR548AJ2-201ENST00000408539 92 ntBASIC0.58□□□□□ -2.32
COL17A1Q9UMD9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.58□□□□□ -2.32
COL17A1Q9UMD9 AC244250.2-201ENST00000418731 148 ntBASIC0.58□□□□□ -2.32
COL17A1Q9UMD9 MIR409-201ENST00000362237 79 ntBASIC0.57□□□□□ -2.32
COL17A1Q9UMD9 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
COL17A1Q9UMD9 AC120024.2-201ENST00000576526 175 ntBASIC0.57□□□□□ -2.32
COL17A1Q9UMD9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.56□□□□□ -2.32
COL17A1Q9UMD9 SNORA50A-201ENST00000384225 134 ntBASIC0.56□□□□□ -2.32
COL17A1Q9UMD9 RNU6-695P-201ENST00000391157 104 ntBASIC0.56□□□□□ -2.32
COL17A1Q9UMD9 SNORD114-17-201ENST00000364699 75 ntBASIC0.55□□□□□ -2.32
COL17A1Q9UMD9 RNA5SP266-201ENST00000410273 108 ntBASIC0.55□□□□□ -2.32
COL17A1Q9UMD9 AC090625.1-201ENST00000357130 210 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 MIR148A-201ENST00000362215 68 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 RNU6-912P-201ENST00000363800 104 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 MIR892B-201ENST00000401279 77 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 SNORD45C-201ENST00000383893 79 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 FTX_4.1-201ENST00000616291 147 ntBASIC0.54□□□□□ -2.32
COL17A1Q9UMD9 MIR655-201ENST00000362159 97 ntBASIC0.53□□□□□ -2.33
COL17A1Q9UMD9 MIR379-201ENST00000362218 67 ntBASIC0.53□□□□□ -2.33
COL17A1Q9UMD9 RNU6-929P-201ENST00000384429 107 ntBASIC0.53□□□□□ -2.33
COL17A1Q9UMD9 AC090616.4-201ENST00000448026 115 ntBASIC0.53□□□□□ -2.33
COL17A1Q9UMD9 MIR6851-201ENST00000617060 67 ntBASIC0.53□□□□□ -2.33
COL17A1Q9UMD9 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
COL17A1Q9UMD9 SNORD22.1-201ENST00000516331 125 ntBASIC0.52□□□□□ -2.33
COL17A1Q9UMD9 SNORD74.6-201ENST00000364796 70 ntBASIC0.51□□□□□ -2.33
COL17A1Q9UMD9 Y_RNA.457-201ENST00000384237 111 ntBASIC0.51□□□□□ -2.33
COL17A1Q9UMD9 MIR593-201ENST00000384856 100 ntBASIC0.51□□□□□ -2.33
COL17A1Q9UMD9 Y_RNA.335-201ENST00000365299 96 ntBASIC0.5□□□□□ -2.33
COL17A1Q9UMD9 MIR23C-201ENST00000579846 100 ntBASIC0.5□□□□□ -2.33
COL17A1Q9UMD9 IGLVI-20-201ENST00000519296 130 ntBASIC0.49□□□□□ -2.33
COL17A1Q9UMD9 AC069113.3-201ENST00000521019 150 ntBASIC0.49□□□□□ -2.33
COL17A1Q9UMD9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.49□□□□□ -2.33
COL17A1Q9UMD9 MIR518B-201ENST00000385127 83 ntBASIC0.48□□□□□ -2.33
COL17A1Q9UMD9 SNORD18C-201ENST00000362704 69 ntBASIC0.48□□□□□ -2.33
COL17A1Q9UMD9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.47□□□□□ -2.33
COL17A1Q9UMD9 AP000533.3-201ENST00000447704 118 ntBASIC0.47□□□□□ -2.33
COL17A1Q9UMD9 MIR4645-201ENST00000583158 77 ntBASIC0.45□□□□□ -2.34
COL17A1Q9UMD9 SNORD75.1-201ENST00000408373 60 ntBASIC0.44□□□□□ -2.34
COL17A1Q9UMD9 RNU7-165P-201ENST00000458864 60 ntBASIC0.44□□□□□ -2.34
COL17A1Q9UMD9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.44□□□□□ -2.34
COL17A1Q9UMD9 RNA5SP26-201ENST00000362406 119 ntBASIC0.43□□□□□ -2.34
COL17A1Q9UMD9 MIR145-201ENST00000384967 88 ntBASIC0.42□□□□□ -2.34
COL17A1Q9UMD9 MIR610-201ENST00000385139 96 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 RNU7-159P-201ENST00000459284 62 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR4315-1-201ENST00000636800 73 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR4315-2-201ENST00000640925 73 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 SNX3P1X-201ENST00000414887 175 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR3179-1-201ENST00000578940 84 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR3179-2-201ENST00000579107 84 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR3179-3-201ENST00000579566 84 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 MIR3179-4-201ENST00000617599 84 ntBASIC0.41□□□□□ -2.34
COL17A1Q9UMD9 Y_RNA.189-201ENST00000363959 112 ntBASIC0.4□□□□□ -2.35
COL17A1Q9UMD9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
COL17A1Q9UMD9 RNA5SP66-201ENST00000517178 101 ntBASIC0.4□□□□□ -2.35
COL17A1Q9UMD9 Y_RNA.781-201ENST00000620301 103 ntBASIC0.4□□□□□ -2.35
COL17A1Q9UMD9 SNORD49B-201ENST00000365172 72 ntBASIC0.39□□□□□ -2.35
COL17A1Q9UMD9 MIR604-201ENST00000384880 94 ntBASIC0.39□□□□□ -2.35
COL17A1Q9UMD9 MIR1254-1-201ENST00000408257 97 ntBASIC0.39□□□□□ -2.35
COL17A1Q9UMD9 Y_RNA.610-201ENST00000410681 103 ntBASIC0.39□□□□□ -2.35
COL17A1Q9UMD9 SNORD95.1-201ENST00000364099 68 ntBASIC0.38□□□□□ -2.35
COL17A1Q9UMD9 MIR656-201ENST00000385224 78 ntBASIC0.38□□□□□ -2.35
COL17A1Q9UMD9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
COL17A1Q9UMD9 AL590491.3-201ENST00000610731 82 ntBASIC0.37□□□□□ -2.35
COL17A1Q9UMD9 AC093726.3-201ENST00000637588 150 ntBASIC0.37□□□□□ -2.35
COL17A1Q9UMD9 SNORA32.1-201ENST00000364514 115 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 RNU6-1324P-201ENST00000384222 107 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 MIR204-201ENST00000385200 110 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 MIR4493-201ENST00000584016 73 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 MIR4743-201ENST00000584576 69 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 SNORD114-5-201ENST00000362928 70 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 SNORD114-31-201ENST00000363219 75 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 RNA5SP214-201ENST00000363378 118 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 Y_RNA.434-201ENST00000384090 100 ntBASIC0.35□□□□□ -2.35
COL17A1Q9UMD9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.33□□□□□ -2.36
COL17A1Q9UMD9 RNU6-79P-201ENST00000362511 107 ntBASIC0.32□□□□□ -2.36
COL17A1Q9UMD9 AC018880.2-201ENST00000414265 201 ntBASIC0.32□□□□□ -2.36
COL17A1Q9UMD9 SNORA13-201ENST00000458790 133 ntBASIC0.32□□□□□ -2.36
COL17A1Q9UMD9 AP001180.6-201ENST00000584918 159 ntBASIC0.32□□□□□ -2.36
COL17A1Q9UMD9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.32□□□□□ -2.36
COL17A1Q9UMD9 RNU6-46P-201ENST00000383860 107 ntBASIC0.31□□□□□ -2.36
COL17A1Q9UMD9 RNU6-620P-201ENST00000384017 96 ntBASIC0.31□□□□□ -2.36
COL17A1Q9UMD9 RNU6-1340P-201ENST00000384438 107 ntBASIC0.31□□□□□ -2.36
COL17A1Q9UMD9 RNU6-345P-201ENST00000517001 107 ntBASIC0.3□□□□□ -2.36
COL17A1Q9UMD9 AL500527.2-201ENST00000454105 95 ntBASIC0.29□□□□□ -2.36
COL17A1Q9UMD9 SNORD114-9-201ENST00000364370 72 ntBASIC0.29□□□□□ -2.36
COL17A1Q9UMD9 RNU6-1024P-201ENST00000384199 107 ntBASIC0.29□□□□□ -2.36
COL17A1Q9UMD9 MIR4768-201ENST00000585270 74 ntBASIC0.29□□□□□ -2.36
COL17A1Q9UMD9 RNU6-284P-201ENST00000411105 106 ntBASIC0.28□□□□□ -2.37
COL17A1Q9UMD9 MIR371B-201ENST00000638082 66 ntBASIC0.28□□□□□ -2.37
COL17A1Q9UMD9 RPS29P8-201ENST00000445109 171 ntBASIC0.27□□□□□ -2.37
COL17A1Q9UMD9 SNORD114-11-201ENST00000363738 75 ntBASIC0.25□□□□□ -2.37
COL17A1Q9UMD9 SNORD114-12-201ENST00000365400 75 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms