Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RNU6-313P-201ENST00000516317 112 ntBASIC-2.96□□□□□ -2.88
HPF1Q9NWY4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.96□□□□□ -2.88
HPF1Q9NWY4 RNY1P1-201ENST00000364372 112 ntBASIC-2.97□□□□□ -2.88
HPF1Q9NWY4 RNU6-32P-201ENST00000383948 107 ntBASIC-2.97□□□□□ -2.88
HPF1Q9NWY4 RNU6-13P-201ENST00000384248 107 ntBASIC-2.97□□□□□ -2.88
HPF1Q9NWY4 RNU6-12P-201ENST00000384604 107 ntBASIC-2.97□□□□□ -2.88
HPF1Q9NWY4 RNU6-41P-201ENST00000384741 107 ntBASIC-2.97□□□□□ -2.88
HPF1Q9NWY4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.98□□□□□ -2.89
HPF1Q9NWY4 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.99□□□□□ -2.89
HPF1Q9NWY4 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.99□□□□□ -2.89
HPF1Q9NWY4 RNU6-974P-201ENST00000384099 108 ntBASIC-2.99□□□□□ -2.89
HPF1Q9NWY4 MIR125B1-201ENST00000385236 88 ntBASIC-2.99□□□□□ -2.89
HPF1Q9NWY4 Y_RNA.139-201ENST00000363464 102 ntBASIC-3□□□□□ -2.89
HPF1Q9NWY4 RNU6-640P-201ENST00000363693 105 ntBASIC-3□□□□□ -2.89
HPF1Q9NWY4 SNORD116-24-201ENST00000384549 92 ntBASIC-3□□□□□ -2.89
HPF1Q9NWY4 RNY4P7-201ENST00000364600 96 ntBASIC-3.01□□□□□ -2.89
HPF1Q9NWY4 RNU6-520P-201ENST00000384717 104 ntBASIC-3.02□□□□□ -2.89
HPF1Q9NWY4 snosnR66.1-201ENST00000391095 99 ntBASIC-3.02□□□□□ -2.89
HPF1Q9NWY4 SNORD18C-201ENST00000362704 69 ntBASIC-3.03□□□□□ -2.89
HPF1Q9NWY4 RNU6-542P-201ENST00000516405 103 ntBASIC-3.03□□□□□ -2.89
HPF1Q9NWY4 RNU6-92P-201ENST00000605893 104 ntBASIC-3.03□□□□□ -2.89
HPF1Q9NWY4 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.04□□□□□ -2.9
HPF1Q9NWY4 snoU13.10-201ENST00000459301 103 ntBASIC-3.04□□□□□ -2.9
HPF1Q9NWY4 MIR5588-201ENST00000581890 63 ntBASIC-3.04□□□□□ -2.9
HPF1Q9NWY4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.04□□□□□ -2.9
HPF1Q9NWY4 SNORD115-31-201ENST00000365318 82 ntBASIC-3.05□□□□□ -2.9
HPF1Q9NWY4 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.05□□□□□ -2.9
HPF1Q9NWY4 SNORD60-201ENST00000383903 83 ntBASIC-3.06□□□□□ -2.9
HPF1Q9NWY4 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.06□□□□□ -2.9
HPF1Q9NWY4 RNU7-160P-201ENST00000516660 62 ntBASIC-3.06□□□□□ -2.9
HPF1Q9NWY4 MIR7110-201ENST00000612638 86 ntBASIC-3.06□□□□□ -2.9
HPF1Q9NWY4 RNU6-828P-201ENST00000364876 107 ntBASIC-3.07□□□□□ -2.9
HPF1Q9NWY4 RNU6-649P-201ENST00000384463 107 ntBASIC-3.07□□□□□ -2.9
HPF1Q9NWY4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.07□□□□□ -2.9
HPF1Q9NWY4 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.08□□□□□ -2.9
HPF1Q9NWY4 SNORD54-201ENST00000459159 67 ntBASIC-3.08□□□□□ -2.9
HPF1Q9NWY4 MIR202-201ENST00000362219 110 ntBASIC-3.09□□□□□ -2.9
HPF1Q9NWY4 RNU6-194P-201ENST00000363862 105 ntBASIC-3.09□□□□□ -2.9
HPF1Q9NWY4 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.1□□□□□ -2.91
HPF1Q9NWY4 MIR548W-201ENST00000581970 74 ntBASIC-3.1□□□□□ -2.91
HPF1Q9NWY4 RNU6-810P-201ENST00000364001 107 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 SNORD116.2-201ENST00000391251 93 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 RNU6-118P-201ENST00000516552 102 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 MIR548AI-201ENST00000579940 88 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 MIR4712-201ENST00000583750 82 ntBASIC-3.11□□□□□ -2.91
HPF1Q9NWY4 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.12□□□□□ -2.91
HPF1Q9NWY4 RNU6-979P-201ENST00000383896 107 ntBASIC-3.12□□□□□ -2.91
HPF1Q9NWY4 RNU6-147P-201ENST00000383983 107 ntBASIC-3.12□□□□□ -2.91
HPF1Q9NWY4 MIR1245B-201ENST00000636115 69 ntBASIC-3.12□□□□□ -2.91
HPF1Q9NWY4 MIR548M-201ENST00000408260 86 ntBASIC-3.13□□□□□ -2.91
HPF1Q9NWY4 SNORD60.1-201ENST00000362451 73 ntBASIC-3.14□□□□□ -2.91
HPF1Q9NWY4 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.14□□□□□ -2.91
HPF1Q9NWY4 MIR3668-201ENST00000582138 75 ntBASIC-3.15□□□□□ -2.91
HPF1Q9NWY4 RNU6-231P-201ENST00000517122 103 ntBASIC-3.16□□□□□ -2.92
HPF1Q9NWY4 MIR3134-201ENST00000579433 74 ntBASIC-3.16□□□□□ -2.92
HPF1Q9NWY4 RNU7-171P-201ENST00000459581 62 ntBASIC-3.18□□□□□ -2.92
HPF1Q9NWY4 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.18□□□□□ -2.92
HPF1Q9NWY4 RNA5SP405-201ENST00000363059 114 ntBASIC-3.19□□□□□ -2.92
HPF1Q9NWY4 RNU6-49P-201ENST00000384256 107 ntBASIC-3.19□□□□□ -2.92
HPF1Q9NWY4 SNORA17.4-201ENST00000391287 132 ntBASIC-3.19□□□□□ -2.92
HPF1Q9NWY4 MIR466-201ENST00000580653 84 ntBASIC-3.19□□□□□ -2.92
HPF1Q9NWY4 MIR581-201ENST00000384895 96 ntBASIC-3.2□□□□□ -2.92
HPF1Q9NWY4 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.21□□□□□ -2.92
HPF1Q9NWY4 RNU6-687P-201ENST00000516443 89 ntBASIC-3.21□□□□□ -2.92
HPF1Q9NWY4 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.22□□□□□ -2.92
HPF1Q9NWY4 RNU6-242P-201ENST00000384359 107 ntBASIC-3.22□□□□□ -2.92
HPF1Q9NWY4 MIR548N-201ENST00000408742 75 ntBASIC-3.22□□□□□ -2.92
HPF1Q9NWY4 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.22□□□□□ -2.92
HPF1Q9NWY4 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.23□□□□□ -2.93
HPF1Q9NWY4 AC097484.2-201ENST00000509147 251 ntBASIC-3.23□□□□□ -2.93
HPF1Q9NWY4 RNU6-530P-201ENST00000391180 107 ntBASIC-3.24□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.24□□□□□ -2.93
HPF1Q9NWY4 MIR3139-201ENST00000579145 76 ntBASIC-3.26□□□□□ -2.93
HPF1Q9NWY4 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.26□□□□□ -2.93
HPF1Q9NWY4 FTX_4.1-201ENST00000616291 147 ntBASIC-3.26□□□□□ -2.93
HPF1Q9NWY4 MIR494-201ENST00000349529 81 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 SNORD45.2-201ENST00000363552 72 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 RNU6-411P-201ENST00000384451 107 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 SNORA40B-201ENST00000385573 128 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.27□□□□□ -2.93
HPF1Q9NWY4 RNU6-361P-201ENST00000364454 107 ntBASIC-3.28□□□□□ -2.93
HPF1Q9NWY4 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.29□□□□□ -2.94
HPF1Q9NWY4 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.3□□□□□ -2.94
HPF1Q9NWY4 RNY4P30-201ENST00000410216 95 ntBASIC-3.3□□□□□ -2.94
HPF1Q9NWY4 RNU6-919P-201ENST00000516731 104 ntBASIC-3.3□□□□□ -2.94
HPF1Q9NWY4 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.31□□□□□ -2.94
HPF1Q9NWY4 MIR3671-201ENST00000580455 88 ntBASIC-3.31□□□□□ -2.94
HPF1Q9NWY4 MIR3910-1-201ENST00000580936 111 ntBASIC-3.31□□□□□ -2.94
HPF1Q9NWY4 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.32□□□□□ -2.94
HPF1Q9NWY4 SNORD20-201ENST00000384550 80 ntBASIC-3.32□□□□□ -2.94
HPF1Q9NWY4 RNA5SP93-201ENST00000362525 114 ntBASIC-3.33□□□□□ -2.94
HPF1Q9NWY4 SNORA25.5-201ENST00000363782 126 ntBASIC-3.33□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms