Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC010487.4-201ENST00000637027 61 ntBASIC1.44□□□□□ -2.18
SENP3Q9H4L4 MIR3179-1-201ENST00000578940 84 ntBASIC1.43□□□□□ -2.18
SENP3Q9H4L4 MIR3179-2-201ENST00000579107 84 ntBASIC1.43□□□□□ -2.18
SENP3Q9H4L4 MIR3179-3-201ENST00000579566 84 ntBASIC1.43□□□□□ -2.18
SENP3Q9H4L4 MIR3179-4-201ENST00000617599 84 ntBASIC1.43□□□□□ -2.18
SENP3Q9H4L4 MIR6513-201ENST00000621188 64 ntBASIC1.43□□□□□ -2.18
SENP3Q9H4L4 RNU4-38P-201ENST00000364472 129 ntBASIC1.42□□□□□ -2.18
SENP3Q9H4L4 RNA5SP66-201ENST00000517178 101 ntBASIC1.4□□□□□ -2.19
SENP3Q9H4L4 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
SENP3Q9H4L4 AC018880.2-201ENST00000414265 201 ntBASIC1.39□□□□□ -2.19
SENP3Q9H4L4 MIRLET7D-201ENST00000362263 87 ntBASIC1.38□□□□□ -2.19
SENP3Q9H4L4 Y_RNA.189-201ENST00000363959 112 ntBASIC1.38□□□□□ -2.19
SENP3Q9H4L4 RNU7-165P-201ENST00000458864 60 ntBASIC1.38□□□□□ -2.19
SENP3Q9H4L4 AL500527.2-201ENST00000454105 95 ntBASIC1.37□□□□□ -2.19
SENP3Q9H4L4 RNU7-159P-201ENST00000459284 62 ntBASIC1.37□□□□□ -2.19
SENP3Q9H4L4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SENP3Q9H4L4 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
SENP3Q9H4L4 AC093726.3-201ENST00000637588 150 ntBASIC1.36□□□□□ -2.19
SENP3Q9H4L4 MIR610-201ENST00000385139 96 ntBASIC1.35□□□□□ -2.19
SENP3Q9H4L4 MIR146A-201ENST00000385201 99 ntBASIC1.35□□□□□ -2.19
SENP3Q9H4L4 SNORA13-201ENST00000458790 133 ntBASIC1.35□□□□□ -2.19
SENP3Q9H4L4 MIR2909-201ENST00000617113 69 ntBASIC1.35□□□□□ -2.19
SENP3Q9H4L4 RNU6-79P-201ENST00000362511 107 ntBASIC1.33□□□□□ -2.2
SENP3Q9H4L4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SENP3Q9H4L4 SNORD49B-201ENST00000365172 72 ntBASIC1.31□□□□□ -2.2
SENP3Q9H4L4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.31□□□□□ -2.2
SENP3Q9H4L4 RNA5SP193-201ENST00000410353 107 ntBASIC1.3□□□□□ -2.2
SENP3Q9H4L4 MIR330-201ENST00000362196 94 ntBASIC1.29□□□□□ -2.2
SENP3Q9H4L4 MIR532-201ENST00000385025 91 ntBASIC1.29□□□□□ -2.2
SENP3Q9H4L4 MIR508-201ENST00000384857 115 ntBASIC1.27□□□□□ -2.21
SENP3Q9H4L4 MIR204-201ENST00000385200 110 ntBASIC1.27□□□□□ -2.21
SENP3Q9H4L4 MIR6857-201ENST00000613267 93 ntBASIC1.26□□□□□ -2.21
SENP3Q9H4L4 MIR145-201ENST00000384967 88 ntBASIC1.25□□□□□ -2.21
SENP3Q9H4L4 MIR4743-201ENST00000584576 69 ntBASIC1.24□□□□□ -2.21
SENP3Q9H4L4 AL627230.5-201ENST00000619807 58 ntBASIC1.24□□□□□ -2.21
SENP3Q9H4L4 RNU6-1043P-201ENST00000410355 99 ntBASIC1.22□□□□□ -2.21
SENP3Q9H4L4 RNU6-422P-201ENST00000384632 107 ntBASIC1.21□□□□□ -2.22
SENP3Q9H4L4 MIR6835-201ENST00000621552 64 ntBASIC1.21□□□□□ -2.22
SENP3Q9H4L4 MIR4711-201ENST00000578274 70 ntBASIC1.2□□□□□ -2.22
SENP3Q9H4L4 SNORD19B.1-201ENST00000630615 80 ntBASIC1.2□□□□□ -2.22
SENP3Q9H4L4 AL590491.3-201ENST00000610731 82 ntBASIC1.19□□□□□ -2.22
SENP3Q9H4L4 RNA5SP285-201ENST00000516619 119 ntBASIC1.16□□□□□ -2.22
SENP3Q9H4L4 MIR4636-201ENST00000582271 80 ntBASIC1.16□□□□□ -2.22
SENP3Q9H4L4 VTRNA1-3-201ENST00000365645 89 ntBASIC1.15□□□□□ -2.23
SENP3Q9H4L4 Z95118.1-201ENST00000421372 247 ntBASIC1.15□□□□□ -2.23
SENP3Q9H4L4 SNORA62.5-201ENST00000516634 120 ntBASIC1.15□□□□□ -2.23
SENP3Q9H4L4 RNU6-46P-201ENST00000383860 107 ntBASIC1.14□□□□□ -2.23
SENP3Q9H4L4 MIR548H1-201ENST00000408610 102 ntBASIC1.14□□□□□ -2.23
SENP3Q9H4L4 Y_RNA.349-201ENST00000365406 102 ntBASIC1.12□□□□□ -2.23
SENP3Q9H4L4 Y_RNA.59-201ENST00000362828 102 ntBASIC1.1□□□□□ -2.23
SENP3Q9H4L4 RPL39P28-201ENST00000465655 155 ntBASIC1.1□□□□□ -2.23
SENP3Q9H4L4 MIR4315-1-201ENST00000636800 73 ntBASIC1.09□□□□□ -2.23
SENP3Q9H4L4 MIR4315-2-201ENST00000640925 73 ntBASIC1.09□□□□□ -2.23
SENP3Q9H4L4 MIR4514-201ENST00000581410 57 ntBASIC1.08□□□□□ -2.24
SENP3Q9H4L4 RNA5SP347-201ENST00000362445 119 ntBASIC1.07□□□□□ -2.24
SENP3Q9H4L4 MIR4653-201ENST00000585107 83 ntBASIC1.07□□□□□ -2.24
SENP3Q9H4L4 MIR4802-201ENST00000581881 80 ntBASIC1.06□□□□□ -2.24
SENP3Q9H4L4 SNORD114-2-201ENST00000363953 78 ntBASIC1.04□□□□□ -2.24
SENP3Q9H4L4 MIR6866-201ENST00000638146 69 ntBASIC1.04□□□□□ -2.24
SENP3Q9H4L4 RNA5SP499-201ENST00000363982 119 ntBASIC1.03□□□□□ -2.24
SENP3Q9H4L4 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
SENP3Q9H4L4 RNU6-854P-201ENST00000364036 107 ntBASIC1.02□□□□□ -2.25
SENP3Q9H4L4 SNORD114-5-201ENST00000362928 70 ntBASIC1□□□□□ -2.25
SENP3Q9H4L4 RNU6-627P-201ENST00000364032 102 ntBASIC1□□□□□ -2.25
SENP3Q9H4L4 RNU6-1327P-201ENST00000365302 105 ntBASIC1□□□□□ -2.25
SENP3Q9H4L4 SNORD113-3-201ENST00000364830 72 ntBASIC0.99□□□□□ -2.25
SENP3Q9H4L4 RNU6-1034P-201ENST00000365335 101 ntBASIC0.99□□□□□ -2.25
SENP3Q9H4L4 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
SENP3Q9H4L4 RNA5SP214-201ENST00000363378 118 ntBASIC0.97□□□□□ -2.25
SENP3Q9H4L4 MIR4263-201ENST00000584745 83 ntBASIC0.97□□□□□ -2.25
SENP3Q9H4L4 MIR6759-201ENST00000638110 65 ntBASIC0.95□□□□□ -2.26
SENP3Q9H4L4 MIR6818-201ENST00000621576 65 ntBASIC0.93□□□□□ -2.26
SENP3Q9H4L4 RNU6-164P-201ENST00000364604 103 ntBASIC0.92□□□□□ -2.26
SENP3Q9H4L4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.92□□□□□ -2.26
SENP3Q9H4L4 AC104692.1-201ENST00000472406 90 ntBASIC0.9□□□□□ -2.27
SENP3Q9H4L4 MIR5589-201ENST00000579442 60 ntBASIC0.9□□□□□ -2.27
SENP3Q9H4L4 RNU6-30P-201ENST00000384561 107 ntBASIC0.87□□□□□ -2.27
SENP3Q9H4L4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
SENP3Q9H4L4 RNA5SP63-201ENST00000391225 112 ntBASIC0.86□□□□□ -2.27
SENP3Q9H4L4 Y_RNA.63-201ENST00000362841 102 ntBASIC0.85□□□□□ -2.27
SENP3Q9H4L4 RNA5SP331-201ENST00000364986 107 ntBASIC0.83□□□□□ -2.28
SENP3Q9H4L4 SNORD114-9-201ENST00000364370 72 ntBASIC0.8□□□□□ -2.28
SENP3Q9H4L4 snoU13.10-201ENST00000459301 103 ntBASIC0.79□□□□□ -2.28
SENP3Q9H4L4 SNORD114-11-201ENST00000363738 75 ntBASIC0.78□□□□□ -2.28
SENP3Q9H4L4 SNORD114-12-201ENST00000365400 75 ntBASIC0.77□□□□□ -2.29
SENP3Q9H4L4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.77□□□□□ -2.29
SENP3Q9H4L4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.77□□□□□ -2.29
SENP3Q9H4L4 MIR147A-201ENST00000385079 72 ntBASIC0.75□□□□□ -2.29
SENP3Q9H4L4 snoU13.19-201ENST00000459148 104 ntBASIC0.75□□□□□ -2.29
SENP3Q9H4L4 RNU6-983P-201ENST00000516004 103 ntBASIC0.75□□□□□ -2.29
SENP3Q9H4L4 RNU6-431P-201ENST00000383874 107 ntBASIC0.74□□□□□ -2.29
SENP3Q9H4L4 AC114737.2-201ENST00000421583 173 ntBASIC0.74□□□□□ -2.29
SENP3Q9H4L4 Y_RNA.484-201ENST00000384389 103 ntBASIC0.73□□□□□ -2.29
SENP3Q9H4L4 MIR4788-201ENST00000639104 80 ntBASIC0.72□□□□□ -2.29
SENP3Q9H4L4 AC021146.6-201ENST00000514659 117 ntBASIC0.71□□□□□ -2.3
SENP3Q9H4L4 Y_RNA.449-201ENST00000384187 102 ntBASIC0.7□□□□□ -2.3
SENP3Q9H4L4 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
SENP3Q9H4L4 MIR548W-201ENST00000581970 74 ntBASIC0.7□□□□□ -2.3
SENP3Q9H4L4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.7□□□□□ -2.3
SENP3Q9H4L4 RNU6-892P-201ENST00000410335 99 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms