Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU7-159P-201ENST00000459284 62 ntBASIC1.05□□□□□ -2.24
RNF39Q9H2S5 SNORD113-3-201ENST00000364830 72 ntBASIC1.04□□□□□ -2.24
RNF39Q9H2S5 SNORD49B-201ENST00000365172 72 ntBASIC1.04□□□□□ -2.24
RNF39Q9H2S5 MIR5000-201ENST00000577717 103 ntBASIC1.04□□□□□ -2.24
RNF39Q9H2S5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF39Q9H2S5 RNU6-1034P-201ENST00000365335 101 ntBASIC1.03□□□□□ -2.24
RNF39Q9H2S5 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
RNF39Q9H2S5 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
RNF39Q9H2S5 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
RNF39Q9H2S5 RN7SL793P-201ENST00000583259 296 ntBASIC1.01□□□□□ -2.25
RNF39Q9H2S5 MIR4743-201ENST00000584576 69 ntBASIC1.01□□□□□ -2.25
RNF39Q9H2S5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1□□□□□ -2.25
RNF39Q9H2S5 MIRLET7D-201ENST00000362263 87 ntBASIC0.99□□□□□ -2.25
RNF39Q9H2S5 SNORA62.5-201ENST00000516634 120 ntBASIC0.99□□□□□ -2.25
RNF39Q9H2S5 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
RNF39Q9H2S5 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
RNF39Q9H2S5 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
RNF39Q9H2S5 Y_RNA.63-201ENST00000362841 102 ntBASIC0.97□□□□□ -2.25
RNF39Q9H2S5 RNU6-983P-201ENST00000516004 103 ntBASIC0.97□□□□□ -2.25
RNF39Q9H2S5 AL590491.3-201ENST00000610731 82 ntBASIC0.95□□□□□ -2.26
RNF39Q9H2S5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RNF39Q9H2S5 RNU6-46P-201ENST00000383860 107 ntBASIC0.93□□□□□ -2.26
RNF39Q9H2S5 MIR145-201ENST00000384967 88 ntBASIC0.93□□□□□ -2.26
RNF39Q9H2S5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
RNF39Q9H2S5 RNU6-164P-201ENST00000364604 103 ntBASIC0.91□□□□□ -2.26
RNF39Q9H2S5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
RNF39Q9H2S5 MIR4263-201ENST00000584745 83 ntBASIC0.91□□□□□ -2.26
RNF39Q9H2S5 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
RNF39Q9H2S5 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
RNF39Q9H2S5 MIR6818-201ENST00000621576 65 ntBASIC0.87□□□□□ -2.27
RNF39Q9H2S5 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
RNF39Q9H2S5 snoU13.10-201ENST00000459301 103 ntBASIC0.86□□□□□ -2.27
RNF39Q9H2S5 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.86□□□□□ -2.27
RNF39Q9H2S5 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
RNF39Q9H2S5 RNA5SP121-201ENST00000516537 101 ntBASIC0.84□□□□□ -2.27
RNF39Q9H2S5 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
RNF39Q9H2S5 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
RNF39Q9H2S5 MIR4315-1-201ENST00000636800 73 ntBASIC0.83□□□□□ -2.28
RNF39Q9H2S5 MIR4315-2-201ENST00000640925 73 ntBASIC0.83□□□□□ -2.28
RNF39Q9H2S5 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
RNF39Q9H2S5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.81□□□□□ -2.28
RNF39Q9H2S5 MIR548W-201ENST00000581970 74 ntBASIC0.81□□□□□ -2.28
RNF39Q9H2S5 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
RNF39Q9H2S5 Y_RNA.449-201ENST00000384187 102 ntBASIC0.79□□□□□ -2.28
RNF39Q9H2S5 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
RNF39Q9H2S5 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
RNF39Q9H2S5 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
RNF39Q9H2S5 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
RNF39Q9H2S5 AC104692.1-201ENST00000472406 90 ntBASIC0.77□□□□□ -2.29
RNF39Q9H2S5 MIR936-201ENST00000401264 98 ntBASIC0.76□□□□□ -2.29
RNF39Q9H2S5 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
RNF39Q9H2S5 RNA5SP457-201ENST00000363657 124 ntBASIC0.75□□□□□ -2.29
RNF39Q9H2S5 AC010487.4-201ENST00000637027 61 ntBASIC0.75□□□□□ -2.29
RNF39Q9H2S5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.74□□□□□ -2.29
RNF39Q9H2S5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.73□□□□□ -2.29
RNF39Q9H2S5 snoU83B.1-201ENST00000517136 88 ntBASIC0.73□□□□□ -2.29
RNF39Q9H2S5 MIR924-201ENST00000638017 53 ntBASIC0.73□□□□□ -2.29
RNF39Q9H2S5 RNA5SP214-201ENST00000363378 118 ntBASIC0.72□□□□□ -2.29
RNF39Q9H2S5 MIR147A-201ENST00000385079 72 ntBASIC0.72□□□□□ -2.29
RNF39Q9H2S5 SNORD114-5-201ENST00000362928 70 ntBASIC0.71□□□□□ -2.3
RNF39Q9H2S5 Y_RNA.178-201ENST00000363832 102 ntBASIC0.71□□□□□ -2.3
RNF39Q9H2S5 RNA5SP347-201ENST00000362445 119 ntBASIC0.7□□□□□ -2.3
RNF39Q9H2S5 RNU6-737P-201ENST00000365370 107 ntBASIC0.7□□□□□ -2.3
RNF39Q9H2S5 RNU6-400P-201ENST00000391173 106 ntBASIC0.7□□□□□ -2.3
RNF39Q9H2S5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
RNF39Q9H2S5 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
RNF39Q9H2S5 MIR3123-201ENST00000583417 75 ntBASIC0.69□□□□□ -2.3
RNF39Q9H2S5 RNA5SP330-201ENST00000517096 96 ntBASIC0.68□□□□□ -2.3
RNF39Q9H2S5 RNU6-431P-201ENST00000383874 107 ntBASIC0.67□□□□□ -2.3
RNF39Q9H2S5 Y_RNA.484-201ENST00000384389 103 ntBASIC0.67□□□□□ -2.3
RNF39Q9H2S5 MIR124-1-201ENST00000385275 85 ntBASIC0.67□□□□□ -2.3
RNF39Q9H2S5 AC021146.6-201ENST00000514659 117 ntBASIC0.67□□□□□ -2.3
RNF39Q9H2S5 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
RNF39Q9H2S5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.66□□□□□ -2.3
RNF39Q9H2S5 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
RNF39Q9H2S5 MIR8087-201ENST00000612745 78 ntBASIC0.65□□□□□ -2.31
RNF39Q9H2S5 MIR6874-201ENST00000635894 71 ntBASIC0.64□□□□□ -2.31
RNF39Q9H2S5 SNORD114-12-201ENST00000365400 75 ntBASIC0.62□□□□□ -2.31
RNF39Q9H2S5 SNORD64-201ENST00000386683 67 ntBASIC0.62□□□□□ -2.31
RNF39Q9H2S5 MIR330-201ENST00000362196 94 ntBASIC0.61□□□□□ -2.31
RNF39Q9H2S5 SNORD114-11-201ENST00000363738 75 ntBASIC0.61□□□□□ -2.31
RNF39Q9H2S5 AC097484.2-201ENST00000509147 251 ntBASIC0.6□□□□□ -2.31
RNF39Q9H2S5 MIRLET7A2-201ENST00000362105 72 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 RNA5SP257-201ENST00000363023 116 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 SNORD114-9-201ENST00000364370 72 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.647-201ENST00000459194 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.640-201ENST00000459296 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.803-201ENST00000614432 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.815-201ENST00000616655 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.795-201ENST00000619475 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.827-201ENST00000638104 112 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 MIR4788-201ENST00000639104 80 ntBASIC0.59□□□□□ -2.31
RNF39Q9H2S5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.58□□□□□ -2.32
RNF39Q9H2S5 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
RNF39Q9H2S5 AC091912.2-201ENST00000624798 167 ntBASIC0.56□□□□□ -2.32
RNF39Q9H2S5 MIR3666-201ENST00000607845 111 ntBASIC0.55□□□□□ -2.32
RNF39Q9H2S5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.55□□□□□ -2.32
RNF39Q9H2S5 RNU7-134P-201ENST00000458997 64 ntBASIC0.54□□□□□ -2.32
RNF39Q9H2S5 RNU6-576P-201ENST00000390854 102 ntBASIC0.53□□□□□ -2.32
RNF39Q9H2S5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms