Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.28□□□□□ -2.77
CCDC68Q9H2F9 RNU6-895P-201ENST00000384125 103 ntBASIC-2.29□□□□□ -2.78
CCDC68Q9H2F9 SNORD116-16-201ENST00000384533 92 ntBASIC-2.29□□□□□ -2.78
CCDC68Q9H2F9 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.3□□□□□ -2.78
CCDC68Q9H2F9 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.3□□□□□ -2.78
CCDC68Q9H2F9 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.3□□□□□ -2.78
CCDC68Q9H2F9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.3□□□□□ -2.78
CCDC68Q9H2F9 MIR494-201ENST00000349529 81 ntBASIC-2.31□□□□□ -2.78
CCDC68Q9H2F9 MIR23C-201ENST00000579846 100 ntBASIC-2.33□□□□□ -2.78
CCDC68Q9H2F9 U2.22-201ENST00000636441 106 ntBASIC-2.33□□□□□ -2.78
CCDC68Q9H2F9 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.34□□□□□ -2.78
CCDC68Q9H2F9 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.34□□□□□ -2.78
CCDC68Q9H2F9 MIR548AA1-201ENST00000384971 97 ntBASIC-2.34□□□□□ -2.78
CCDC68Q9H2F9 MIR450A2-201ENST00000385022 100 ntBASIC-2.34□□□□□ -2.78
CCDC68Q9H2F9 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.34□□□□□ -2.78
CCDC68Q9H2F9 RNA5SP405-201ENST00000363059 114 ntBASIC-2.35□□□□□ -2.79
CCDC68Q9H2F9 RNU6-258P-201ENST00000390884 101 ntBASIC-2.35□□□□□ -2.79
CCDC68Q9H2F9 SNORA41B-201ENST00000384785 128 ntBASIC-2.36□□□□□ -2.79
CCDC68Q9H2F9 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.36□□□□□ -2.79
CCDC68Q9H2F9 RNU6-153P-201ENST00000364422 104 ntBASIC-2.37□□□□□ -2.79
CCDC68Q9H2F9 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.37□□□□□ -2.79
CCDC68Q9H2F9 RNU6-294P-201ENST00000364999 102 ntBASIC-2.38□□□□□ -2.79
CCDC68Q9H2F9 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.38□□□□□ -2.79
CCDC68Q9H2F9 MIR3170-201ENST00000582699 77 ntBASIC-2.38□□□□□ -2.79
CCDC68Q9H2F9 SNORD115-31-201ENST00000365318 82 ntBASIC-2.39□□□□□ -2.79
CCDC68Q9H2F9 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.39□□□□□ -2.79
CCDC68Q9H2F9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.39□□□□□ -2.79
CCDC68Q9H2F9 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.39□□□□□ -2.79
CCDC68Q9H2F9 RNU6-119P-201ENST00000364882 107 ntBASIC-2.4□□□□□ -2.79
CCDC68Q9H2F9 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.4□□□□□ -2.79
CCDC68Q9H2F9 MIR548W-201ENST00000581970 74 ntBASIC-2.4□□□□□ -2.79
CCDC68Q9H2F9 AC013734.1-201ENST00000619329 111 ntBASIC-2.4□□□□□ -2.79
CCDC68Q9H2F9 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.41□□□□□ -2.8
CCDC68Q9H2F9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.41□□□□□ -2.8
CCDC68Q9H2F9 RNU6-247P-201ENST00000362636 107 ntBASIC-2.42□□□□□ -2.8
CCDC68Q9H2F9 SNORD116-24-201ENST00000384549 92 ntBASIC-2.42□□□□□ -2.8
CCDC68Q9H2F9 RNU6-995P-201ENST00000391244 107 ntBASIC-2.42□□□□□ -2.8
CCDC68Q9H2F9 RNU6-118P-201ENST00000516552 102 ntBASIC-2.42□□□□□ -2.8
CCDC68Q9H2F9 MIR3139-201ENST00000579145 76 ntBASIC-2.42□□□□□ -2.8
CCDC68Q9H2F9 SNORD1B-201ENST00000363091 84 ntBASIC-2.43□□□□□ -2.8
CCDC68Q9H2F9 RNU6-194P-201ENST00000363862 105 ntBASIC-2.43□□□□□ -2.8
CCDC68Q9H2F9 MIR4666B-201ENST00000578142 81 ntBASIC-2.43□□□□□ -2.8
CCDC68Q9H2F9 MIR3134-201ENST00000579433 74 ntBASIC-2.44□□□□□ -2.8
CCDC68Q9H2F9 snoU13.10-201ENST00000459301 103 ntBASIC-2.45□□□□□ -2.8
CCDC68Q9H2F9 AC005520.4-201ENST00000604337 90 ntBASIC-2.45□□□□□ -2.8
CCDC68Q9H2F9 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.45□□□□□ -2.8
CCDC68Q9H2F9 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.45□□□□□ -2.8
CCDC68Q9H2F9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.48□□□□□ -2.81
CCDC68Q9H2F9 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.49□□□□□ -2.81
CCDC68Q9H2F9 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.49□□□□□ -2.81
CCDC68Q9H2F9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.49□□□□□ -2.81
CCDC68Q9H2F9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.49□□□□□ -2.81
CCDC68Q9H2F9 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.49□□□□□ -2.81
CCDC68Q9H2F9 RNU6-820P-201ENST00000384273 107 ntBASIC-2.5□□□□□ -2.81
CCDC68Q9H2F9 RNU6-542P-201ENST00000516405 103 ntBASIC-2.5□□□□□ -2.81
CCDC68Q9H2F9 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.5□□□□□ -2.81
CCDC68Q9H2F9 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.5□□□□□ -2.81
CCDC68Q9H2F9 RNU6-687P-201ENST00000516443 89 ntBASIC-2.51□□□□□ -2.81
CCDC68Q9H2F9 MIR4748-201ENST00000578076 82 ntBASIC-2.51□□□□□ -2.81
CCDC68Q9H2F9 U6.97-201ENST00000636904 101 ntBASIC-2.51□□□□□ -2.81
CCDC68Q9H2F9 RNU7-151P-201ENST00000516930 53 ntBASIC-2.52□□□□□ -2.81
CCDC68Q9H2F9 MIR5582-201ENST00000579697 68 ntBASIC-2.52□□□□□ -2.81
CCDC68Q9H2F9 RNU6-411P-201ENST00000384451 107 ntBASIC-2.53□□□□□ -2.81
CCDC68Q9H2F9 RNU6-172P-201ENST00000411000 93 ntBASIC-2.53□□□□□ -2.81
CCDC68Q9H2F9 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.54□□□□□ -2.82
CCDC68Q9H2F9 MT-TM-201ENST00000387377 68 ntBASIC-2.54□□□□□ -2.82
CCDC68Q9H2F9 MIR579-201ENST00000385221 98 ntBASIC-2.55□□□□□ -2.82
CCDC68Q9H2F9 MIR466-201ENST00000580653 84 ntBASIC-2.55□□□□□ -2.82
CCDC68Q9H2F9 RNU6-92P-201ENST00000605893 104 ntBASIC-2.56□□□□□ -2.82
CCDC68Q9H2F9 U7.4-201ENST00000614961 63 ntBASIC-2.56□□□□□ -2.82
CCDC68Q9H2F9 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.57□□□□□ -2.82
CCDC68Q9H2F9 RNU6-787P-201ENST00000384032 107 ntBASIC-2.58□□□□□ -2.82
CCDC68Q9H2F9 RNY3P8-201ENST00000411366 126 ntBASIC-2.58□□□□□ -2.82
CCDC68Q9H2F9 SNORA27.2-201ENST00000363365 126 ntBASIC-2.59□□□□□ -2.82
CCDC68Q9H2F9 MIR496-201ENST00000385226 102 ntBASIC-2.59□□□□□ -2.82
CCDC68Q9H2F9 RNU6-669P-201ENST00000365575 107 ntBASIC-2.6□□□□□ -2.83
CCDC68Q9H2F9 MIR581-201ENST00000384895 96 ntBASIC-2.6□□□□□ -2.83
CCDC68Q9H2F9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.61□□□□□ -2.83
CCDC68Q9H2F9 SNORD63.2-201ENST00000516303 64 ntBASIC-2.61□□□□□ -2.83
CCDC68Q9H2F9 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.62□□□□□ -2.83
CCDC68Q9H2F9 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.62□□□□□ -2.83
CCDC68Q9H2F9 FTX_4.1-201ENST00000616291 147 ntBASIC-2.62□□□□□ -2.83
CCDC68Q9H2F9 RNU6-974P-201ENST00000384099 108 ntBASIC-2.63□□□□□ -2.83
CCDC68Q9H2F9 AC097484.2-201ENST00000509147 251 ntBASIC-2.63□□□□□ -2.83
CCDC68Q9H2F9 AC062037.1-201ENST00000605302 128 ntBASIC-2.63□□□□□ -2.83
CCDC68Q9H2F9 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.64□□□□□ -2.83
CCDC68Q9H2F9 MIR7978-201ENST00000636158 59 ntBASIC-2.64□□□□□ -2.83
CCDC68Q9H2F9 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.65□□□□□ -2.83
CCDC68Q9H2F9 RNU6-523P-201ENST00000516304 54 ntBASIC-2.67□□□□□ -2.84
CCDC68Q9H2F9 SNORD18C-201ENST00000362704 69 ntBASIC-2.68□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.68□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.68□□□□□ -2.84
CCDC68Q9H2F9 MIR125B1-201ENST00000385236 88 ntBASIC-2.68□□□□□ -2.84
CCDC68Q9H2F9 RNU6-634P-201ENST00000459134 106 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.69□□□□□ -2.84
CCDC68Q9H2F9 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.69□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms