Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MT-TR-201ENST00000387439 65 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 RNU7-151P-201ENST00000516930 53 ntBASIC-2.67□□□□□ -2.84
RPRD1AQ96P16 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.68□□□□□ -2.84
RPRD1AQ96P16 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.68□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.69□□□□□ -2.84
RPRD1AQ96P16 AC005520.4-201ENST00000604337 90 ntBASIC-2.69□□□□□ -2.84
RPRD1AQ96P16 RNU6-147P-201ENST00000383983 107 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 MIR5588-201ENST00000581890 63 ntBASIC-2.7□□□□□ -2.84
RPRD1AQ96P16 SNORD115-31-201ENST00000365318 82 ntBASIC-2.71□□□□□ -2.84
RPRD1AQ96P16 MIR579-201ENST00000385221 98 ntBASIC-2.71□□□□□ -2.84
RPRD1AQ96P16 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 RNU6-172P-201ENST00000411000 93 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 MIR548W-201ENST00000581970 74 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 IGLL4P-201ENST00000614590 133 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.72□□□□□ -2.84
RPRD1AQ96P16 RNU6-669P-201ENST00000365575 107 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORD116-24-201ENST00000384549 92 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORD63.2-201ENST00000516303 64 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 MIR7978-201ENST00000636158 59 ntBASIC-2.73□□□□□ -2.85
RPRD1AQ96P16 SNORA27.2-201ENST00000363365 126 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 RNY1P1-201ENST00000364372 112 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 MIR3910-1-201ENST00000580936 111 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 U6.97-201ENST00000636904 101 ntBASIC-2.74□□□□□ -2.85
RPRD1AQ96P16 MIR154-201ENST00000385243 84 ntBASIC-2.75□□□□□ -2.85
RPRD1AQ96P16 snoU13.10-201ENST00000459301 103 ntBASIC-2.75□□□□□ -2.85
RPRD1AQ96P16 RNU6-979P-201ENST00000383896 107 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-895P-201ENST00000384125 103 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-70P-201ENST00000516438 60 ntBASIC-2.76□□□□□ -2.85
RPRD1AQ96P16 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.77□□□□□ -2.85
RPRD1AQ96P16 SNORD54-201ENST00000459159 67 ntBASIC-2.78□□□□□ -2.85
RPRD1AQ96P16 MIR4712-201ENST00000583750 82 ntBASIC-2.78□□□□□ -2.85
RPRD1AQ96P16 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 RNU6-49P-201ENST00000384256 107 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.79□□□□□ -2.86
RPRD1AQ96P16 MIR125B1-201ENST00000385236 88 ntBASIC-2.8□□□□□ -2.86
RPRD1AQ96P16 SNORD113-1-201ENST00000365321 69 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNY3P8-201ENST00000411366 126 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNU6-789P-201ENST00000517105 102 ntBASIC-2.81□□□□□ -2.86
RPRD1AQ96P16 RNU6-523P-201ENST00000516304 54 ntBASIC-2.82□□□□□ -2.86
RPRD1AQ96P16 MIR1245B-201ENST00000636115 69 ntBASIC-2.82□□□□□ -2.86
RPRD1AQ96P16 RNU7-171P-201ENST00000459581 62 ntBASIC-2.83□□□□□ -2.86
RPRD1AQ96P16 RNU6-215P-201ENST00000365169 102 ntBASIC-2.84□□□□□ -2.86
RPRD1AQ96P16 MIR466-201ENST00000580653 84 ntBASIC-2.84□□□□□ -2.86
RPRD1AQ96P16 RNA5SP93-201ENST00000362525 114 ntBASIC-2.85□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.85□□□□□ -2.87
RPRD1AQ96P16 RNU6-974P-201ENST00000384099 108 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-542P-201ENST00000516405 103 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-919P-201ENST00000516731 104 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 MIR4748-201ENST00000578076 82 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.86□□□□□ -2.87
RPRD1AQ96P16 RNU6-92P-201ENST00000605893 104 ntBASIC-2.87□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.88□□□□□ -2.87
RPRD1AQ96P16 SNORD20-201ENST00000384550 80 ntBASIC-2.88□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR3134-201ENST00000579433 74 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR548AI-201ENST00000579940 88 ntBASIC-2.89□□□□□ -2.87
RPRD1AQ96P16 MIR581-201ENST00000384895 96 ntBASIC-2.9□□□□□ -2.87
RPRD1AQ96P16 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.91□□□□□ -2.88
RPRD1AQ96P16 RNU6-687P-201ENST00000516443 89 ntBASIC-2.92□□□□□ -2.88
RPRD1AQ96P16 RNU7-160P-201ENST00000516660 62 ntBASIC-2.92□□□□□ -2.88
RPRD1AQ96P16 SNORD18C-201ENST00000362704 69 ntBASIC-2.93□□□□□ -2.88
RPRD1AQ96P16 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.93□□□□□ -2.88
RPRD1AQ96P16 RNA5SP89-201ENST00000410300 108 ntBASIC-2.94□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.95□□□□□ -2.88
RPRD1AQ96P16 FTX_4.1-201ENST00000616291 147 ntBASIC-2.95□□□□□ -2.88
RPRD1AQ96P16 SNORD60.1-201ENST00000362451 73 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 AL606753.1-201ENST00000427435 87 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 AC097484.2-201ENST00000509147 251 ntBASIC-2.96□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.97□□□□□ -2.88
RPRD1AQ96P16 MIR7110-201ENST00000612638 86 ntBASIC-2.97□□□□□ -2.88
RPRD1AQ96P16 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-828P-201ENST00000364876 107 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-242P-201ENST00000384359 107 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 RNU6-520P-201ENST00000384717 104 ntBASIC-2.99□□□□□ -2.89
RPRD1AQ96P16 MIR494-201ENST00000349529 81 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.403-201ENST00000383977 101 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-44P-201ENST00000384045 107 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-231P-201ENST00000517122 103 ntBASIC-3□□□□□ -2.89
RPRD1AQ96P16 RNU6-810P-201ENST00000364001 107 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 RNY4P7-201ENST00000364600 96 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.01□□□□□ -2.89
RPRD1AQ96P16 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.02□□□□□ -2.89
RPRD1AQ96P16 MIR4666B-201ENST00000578142 81 ntBASIC-3.02□□□□□ -2.89
RPRD1AQ96P16 MIR202-201ENST00000362219 110 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 RNY4P30-201ENST00000410216 95 ntBASIC-3.03□□□□□ -2.89
RPRD1AQ96P16 RNU6-411P-201ENST00000384451 107 ntBASIC-3.04□□□□□ -2.9
RPRD1AQ96P16 MIR548N-201ENST00000408742 75 ntBASIC-3.04□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms